1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CGGCCAAGGGCGGCAACGAGCAAGGGGGCACCCGCATCTTCGGCCCCTCCCAGAAGTACTCGTCCCGCGACCTCGCCGCGCATACCTCGCTCAAGCTCAGgtattcgctctcccttccatccacctcaccaatctcgaacagtcaggctatttcctttcctctattttgggggccaggactttcgacttggggccgattc...
species | Zea mays |
transcript | GRMZM2G154278_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GAAGTACTCGTCCCCGCGACCTCGCCGCGCCATACCTCGCTCAAGCTCAG AAAAGACGGTCAACAGACCCAAGAGGAGTTACAGAAGAGGAATCTCAGGGAEST: gi|211076270|gb|FL148939.1|FL148939
genomic: GAAGTACTCGT-CCCGCGACCTCGCCGCG-CATACCTCGCTCAAGCTCAGgtattcgctc ... atgtgtacagAAAAGACGGTCAACAGACCCAAGAGGAGTTACAGAAGAGGAATCTCAGGGA
EST: CAGAAGTACTCGTCCCGCGACCTCGCCGCGCATACCTCGCTCAAGCTCAG AAAAGACGGTCAACAGACCCAAGAGGAGTTACAGAAGAGGAATCTCAGGGA
genomic: CAGAAGTACTCGTCCCGCGACCTCGCCGCGCATACCTCGCTCAAGCTCAGgtattcgctc ... atgtgtacagAAAAGACGGTCAACAGACCCAAGAGGAGTTACAGAAGAGGAATCTCAGGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGGCCAAGGGCGGCAACGAGCAAGGGGGCACCCGCATCTTCGGCCCCTCCCAGAAGTACTCGTCCCGCGACCTCGCCGCGCATACCTCGCTCAAGCTCAGgtattcgctctcccttccatccacctcaccaatctcgaacagtcaggctatttcctttcctctattttgggggccaggactttcgacttggggccgattc
- - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctcccttc