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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTGTTCCTCTTCCTCCTTGCCCCCTGAGCAGGCGAGTTGCCAGCCCGGAAACCATTCGAACAGGCCGAGCCCGCCCGCCTCCATTGCTCGCGTGCGTCAGgtgagggcttcgctccttctcggcttgggtgatccattttttcagtgctgcggttttgtgagctcaaactcaaggggtggggttgcctggattgatattt...

Basic information

species Zea mays
transcript GRMZM2G153945_T03
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71435643|gb|DR816693.1|DR816693
EST:     ACCATTCGAACAGGCCGAGCCCGCCCGCCTCCATTGCTCGCGTGCGTCAG                         AGAAGGAAGGAAAAGAAGAACTAGGAGCAGAGTTGAATAGGTCATTATGCG
genomic: ACCATTCGAACAGGCCGAGCCCGCCCGCCTCCATTGCTCGCGTGCGTCAGgtgagggctt ... ccatttgaagAGAAGGAAGGAAAAGAAGAACTAGGAGCAGAGTTGAATAGGTCATTATGCG
EST: gi|37424059|gb|CF649760.1|CF649760
EST:     ACCATTCGAACAGGCCGAGCCCGCCCGCCTCCATTGCTCGCGTGCGTCAG                         AGAAGGAAGGAAAAGAAGAACTAGGAGCAGAGTTGAATAGGTCATTATGCG
genomic: ACCATTCGAACAGGCCGAGCCCGCCCGCCTCCATTGCTCGCGTGCGTCAGgtgagggctt ... ccatttgaagAGAAGGAAGGAAAAGAAGAACTAGGAGCAGAGTTGAATAGGTCATTATGCG