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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACAGAATCATCGCCTCCACCGTTCTCTCTTCCTCTGCTCTTCTCTGCCTGCCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtctctcaccatctctgcagtcaccctagagtccctctctgcctgcccctgccagcgcgggggcgcggtgtggctctcccagatccgcctggca...

Basic information

species Zea mays
transcript GRMZM2G152328_T01
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211274793|gb|FL366584.1|FL366584
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211391310|gb|FL330077.1|FL330077
EST:     CTTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: C-TGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211422125|gb|FL330493.1|FL330493
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCKACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211046893|gb|FL341766.1|FL341766
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211157728|gb|FL360808.1|FL360808
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211077505|gb|FL307130.1|FL307130
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211314060|gb|FL325144.1|FL325144
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211287612|gb|FL250247.1|FL250247
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCKACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211344319|gb|FL310881.1|FL310881
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211285129|gb|FL337146.1|FL337146
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCMG                         GTAGAAAATGGCCGATGMMGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211287611|gb|FL250246.1|FL250246
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211532043|gb|FL347056.1|FL347056
EST:     CYTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCKACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211280214|gb|FL366624.1|FL366624
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211308708|gb|FL364506.1|FL364506
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211340147|gb|FL341977.1|FL341977
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|8273069|gb|BE012164.1|BE012164
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211407470|gb|FL353814.1|FL353814
EST:     CTGAGCTCACCGCACCTTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CTGAGCTCACCGCACC-TCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211134154|gb|FL319319.1|FL319319
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCNACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211444448|gb|FL323468.1|FL323468
EST:     CATGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAAAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211470853|gb|FL358528.1|FL358528
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCNACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|67017533|gb|CO446282.1|CO446282
EST:     CTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAA-GGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211468126|gb|FL352527.1|FL352527
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211059308|gb|FL364336.1|FL364336
EST:     CSTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211287613|gb|FL250248.1|FL250248
EST:     CNTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCNACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211543078|gb|FL311080.1|FL311080
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211210333|gb|FL310322.1|FL310322
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCKACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211531503|gb|FL328874.1|FL328874
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211088879|gb|FL336470.1|FL336470
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211307986|gb|FL326513.1|FL326513
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCNACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|14242811|gb|BG840625.2|BG840625
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211210817|gb|FL334771.1|FL334771
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCNACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211532538|gb|FL366389.1|FL366389
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211188115|gb|FL321601.1|FL321601
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211413966|gb|FL312342.1|FL312342
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCKACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211351953|gb|FL331044.1|FL331044
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTASAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211226828|gb|FL341084.1|FL341084
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211301728|gb|FL323898.1|FL323898
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|5566832|gb|AI881743.1|AI881743
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211469613|gb|FL315638.1|FL315638
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211264639|gb|FL311275.1|FL311275
EST:     CYTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCNACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|8103408|gb|AW928047.1|AW928047
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211340157|gb|FL341987.1|FL341987
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211116610|gb|FL350322.1|FL350322
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211495423|gb|FL352081.1|FL352081
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211424736|gb|FL330505.1|FL330505
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211205587|gb|FL329102.1|FL329102
EST:     CCTGAGCTCACCGCACCTCACCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCKACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211040749|gb|FL336916.1|FL336916
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCNACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211475216|gb|FL333752.1|FL333752
EST:     CCBGAGCTCACCGCACCTCGCCTTCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211440519|gb|FL343491.1|FL343491
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: gi|211393908|gb|FL329734.1|FL329734
EST:     CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCG                         GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: CCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtct ... tctggtgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ACAGAATCATCGCCTCCACCGTTCTCTCTTCCTCTGCTCTTCTCTGCCTGCCTGAGCTCACCGCACCTCGCCTCCTCACCGCGTTTCCTCCGTTAATCCGgtaaccgtctctcaccatctctgcagtcaccctagagtccctctctgcctgcccctgccagcgcgggggcgcggtgtggctctcccagatccgcctggca

- - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cccctgc