1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ATTTCGGACGGGGATGGACGACTACGCCCGGGAGATGATGGAGCTGAAGACGCTCGTCACCCGCACCCTCGAGAAGAAGGGCGTTCTCGCCAAGATTAGGgttcgtacttaccacttctttccttcatttccacatcccttcattgatccggtgcctcacccacaccccaggatctagcttttcccgccctcccgtttgg...
species | Zea mays |
transcript | GRMZM2G151268_T03 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CGCTCGTCACCCGCACCCTCGAGAAGAAGGGCGTTCTCGC-AAGATTAGG GCTGAGCTAAGAGCAAGCGTGTTTGAAGCCATTGAAGAGGAGGATCGGGTGEST: gi|211008060|gb|FL363360.1|FL363360
genomic: CGCTCGTCACCCGCACCCTCGAGAAGAAGGGCGTTCTCGCCAAGATTAGGgttcgtactt ... gcatgactagGCTGAGCTAAGAGCAAGCGTGTTTGAAGCCATTGAAGAGGAGGATCGGGTG
EST: CGCTCGTCACCCGCACCCTCGAGAAGAAGGGCGTTCTCGCCAAGATTAGG GCTGAGCTAAGAGCAAGCGTGTTTGAAGCCATTGAAGAGGAGGATCGGGTGEST: gi|211198617|gb|FL362511.1|FL362511
genomic: CGCTCGTCACCCGCACCCTCGAGAAGAAGGGCGTTCTCGCCAAGATTAGGgttcgtactt ... gcatgactagGCTGAGCTAAGAGCAAGCGTGTTTGAAGCCATTGAAGAGGAGGATCGGGTG
EST: CGCTCGTCACCCGCACCCTCGAGAAGAAGGGCGTTCTCG-CAAGATTAGG GCTGAGCTAAGAGCAAGCGTGTTTGAAGCCATTGAAGAGGAGGATCGGGTGEST: gi|211191821|gb|FL384737.1|FL384737
genomic: CGCTCGTCACCCGCACCCTCGAGAAGAAGGGCGTTCTCGCCAAGATTAGGgttcgtactt ... gcatgactagGCTGAGCTAAGAGCAAGCGTGTTTGAAGCCATTGAAGAGGAGGATCGGGTG
EST: CGCTCGTCACCCGCACCCTCGAGAAGAAGGGCGTTCTCGC-AAGATTAGG GCTGAGCTAAGAGCAAGTGTGTTTGAAGCCATTGAAGAGGAGGATCGGGTGEST: gi|211403469|gb|FL414956.1|FL414956
genomic: CGCTCGTCACCCGCACCCTCGAGAAGAAGGGCGTTCTCGCCAAGATTAGGgttcgtactt ... gcatgactagGCTGAGCTAAGAGCAAGCGTGTTTGAAGCCATTGAAGAGGAGGATCGGGTG
EST: CGCTCGTCACCCGCACCCTCGAGAAGAAGGGCGTTCTCGC-AAGATTAGG GCTGAGCTAAGAGCAAGCGTGTTTGAAGCCATTGAAGAGGAGGATCGGGTG
genomic: CGCTCGTCACCCGCACCCTCGAGAAGAAGGGCGTTCTCGCCAAGATTAGGgttcgtactt ... gcatgactagGCTGAGCTAAGAGCAAGCGTGTTTGAAGCCATTGAAGAGGAGGATCGGGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTTCGGACGGGGATGGACGACTACGCCCGGGAGATGATGGAGCTGAAGACGCTCGTCACCCGCACCCTCGAGAAGAAGGGCGTTCTCGCCAAGATTAGGgttcgtacttaccacttctttccttcatttccacatcccttcattgatccggtgcctcacccacaccccaggatctagcttttcccgccctcccgtttgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG