1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GCCGCAGGACGTGTACAAAATCAGAGTGGATAACTACAAGCCATTCGAGCATGTCTGGCTGGAGCGCAGCGAAGACGGCACCCGACATGTTCACCCGCTGgtcagtgatacactatcctgttgctgcttctctatgttttggtgagttctaacggaatggaggagctataaactcattgatcgatgtgtaagacatggaa...
species | Zea mays |
transcript | GRMZM2G148959_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATGTCTGGCTGGAGCGCAGCGAAGACGGCACCCGACGTGTTCACCCGCTG GAAAACCTGCCTGTTGAACAGTTCGTTGACAGAAATGTTCCTGACAGAGAAEST: gi|211268122|gb|FL015555.1|FL015555
genomic: ATGTCTGGCTGGAGCGCAGCGAAGACGGCACCCGACATGTTCACCCGCTGgtcagtgata ... tttgttgcagGAAAACCTACCTGTTGAACAGTTCGTTGACAGAAATGTTCCTGACAGAGAA
EST: ATGTCTGGCTGGAGCGCAGCGAAGACGGCACCCGACGTGTTCACCCGCTG GAAAACCTGCCTGTTGAACAGTTCGTTGACAGAAATGTTCCTGACAGAGAAEST: gi|211268124|gb|FL015557.1|FL015557
genomic: ATGTCTGGCTGGAGCGCAGCGAAGACGGCACCCGACATGTTCACCCGCTGgtcagtgata ... tttgttgcagGAAAACCTACCTGTTGAACAGTTCGTTGACAGAAATGTTCCTGACAGAGAA
EST: ATGTCTGGCTGGAGCGCAGCGAAGACGGCACCCGACGTGTTCACCCGCTG GAAAACCTGCCTGTTGAACAGTTCGTTGACAGAAATGTTCCTGACAGAGAAEST: gi|211268116|gb|FL015549.1|FL015549
genomic: ATGTCTGGCTGGAGCGCAGCGAAGACGGCACCCGACATGTTCACCCGCTGgtcagtgata ... tttgttgcagGAAAACCTACCTGTTGAACAGTTCGTTGACAGAAATGTTCCTGACAGAGAA
EST: ATGTCTGGCTGGAGCGCAGCGAAGACGGCACCCGACGTGTTCACCCGCTG GAAAACCTGCCTGTTGAACAGTTCGTTGACAGAAATGTTCCTGACAGAGAAEST: gi|211270557|gb|FL015565.1|FL015565
genomic: ATGTCTGGCTGGAGCGCAGCGAAGACGGCACCCGACATGTTCACCCGCTGgtcagtgata ... tttgttgcagGAAAACCTACCTGTTGAACAGTTCGTTGACAGAAATGTTCCTGACAGAGAA
EST: ATGTCTGGCTGGAGCGCAGCGAAGACGGCACCCGACGTGTTCACCCGCTG GAAAACCTGCCTGTTGAACAGTTCGTTGACAGAAATGTTCCTGACAGAGAA
genomic: ATGTCTGGCTGGAGCGCAGCGAAGACGGCACCCGACATGTTCACCCGCTGgtcagtgata ... tttgttgcagGAAAACCTACCTGTTGAACAGTTCGTTGACAGAAATGTTCCTGACAGAGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCGCAGGACGTGTACAAAATCAGAGTGGATAACTACAAGCCATTCGAGCATGTCTGGCTGGAGCGCAGCGAAGACGGCACCCGACATGTTCACCCGCTGgtcagtgatacactatcctgttgctgcttctctatgttttggtgagttctaacggaatggaggagctataaactcattgatcgatgtgtaagacatggaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA