Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|211380038|gb|FL303432.1|FL303432EST: TCACATCCTCGTCCTCGGCCTGGACAATGCTGGCAAGACCACCATACTCT ATAGACTGCAAATGGGAGAGGTCGTCTCCACGATCCCGA
genomic: TCGCATCCTCGTCCTCGGCCTGGACAATGCTGGCAAGACCACCATACTCTgtaagtcgca ... cgtttcacagATAGACTGCAAATGGGAGAGGTCGTCTCCACGATCCCGA
EST:
gi|211068726|gb|FL060703.1|FL060703EST: TCGCATCCTCGTCCTCGGCCTGGACAATGCTGGCAAGACCACCATACTCT ATAGACTGCAAATGGGAGAGGTCGTCTCCACGATCCCGAGTGAGTTCTGAT
genomic: TCGCATCCTCGTCCTCGGCCTGGACAATGCTGGCAAGACCACCATACTCTgtaagtcgca ... cgtttcacagATAGACTGCAAATGGGAGAGGTCGTCTCCACGATCCCGAGTGAGTTCTGAT
EST:
gi|211382668|gb|FL303439.1|FL303439EST: TCGCATCCTCGTCCTCGGCCYGGACAATGCTGGCAAGACCACCATACTCT ATAGACTGCAAATTGGGAGAGGTCGTCTCCACGATCCCGA
genomic: TCGCATCCTCGTCCTCGGCCTGGACAATGCTGGCAAGACCACCATACTCTgtaagtcgca ... cgtttcacagATAGACTGCAAAT-GGGAGAGGTCGTCTCCACGATCCCGA
EST:
gi|211068727|gb|FL060704.1|FL060704EST: TCGCATCCTCGTCCTCGGCCTGGACAATGCTGGCAAGACCACCATACTCT ATAGACTGCAAATGGGAGAAGTCGTCTCCCACGATCCC
genomic: TCGCATCCTCGTCCTCGGCCTGGACAATGCTGGCAAGACCACCATACTCTgtaagtcgca ... cgtttcacagATAGACTGCAAATGGGAGAGGTCGTCTCC-ACGATCCC
EST:
gi|211068734|gb|FL060711.1|FL060711EST: TCGCATCCTCGTCCTCGGCCTGGACAATGCTGGCAAGACCACCATACTCT ATAGACTGCAAATGGGAGAGGTCGTCTCCACGATCCCGAGTGAGTTCTGAT
genomic: TCGCATCCTCGTCCTCGGCCTGGACAATGCTGGCAAGACCACCATACTCTgtaagtcgca ... cgtttcacagATAGACTGCAAATGGGAGAGGTCGTCTCCACGATCCCGAGTGAGTTCTGAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GGCATCGTGTTTACGCGGCTCTTCTCGTCGGTCTTCGGTAACCGCGAGGCTCGCATCCTCGTCCTCGGCCTGGACAATGCTGGCAAGACCACCATACTCTgtaagtcgcacccgcccgttccgtcccctctccctcctcgaatctccacaggtcacccgcagatccgcggttctgttccgcgggggttcccgattctgatccttccgggttgtttcggttcgtttcacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA