1 5' 3' | 2 5' 3' | 3 5' 3' |
CTCTACAAATCCCCGATTAAACCCTAGACTTCCCTCCCCACCCAAATGCGCGCCCCCTCCTAGGCGGCGCCCCTCGAATTCGGCACCGGCTCCGCCGAAGgtacggcatctctcgcgctccgctcgctctattcctgctctgctctggttttgatctagctcgagctcgccggcgctgccgcgttggcgctgtgttgtgt...
species | Zea mays |
transcript | GRMZM2G147226_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CGCCCCCTCCTAGGCGGCGCCCCTCGAATTCGGCACCGGCTCCGCCGTAG GGTGCGTACAATGAGTGCGGGTTTCGACAAGCAGATATTGGCTCAGAAGCTEST: gi|71439110|gb|DR820160.1|DR820160
genomic: CGCCCCCTCCTAGGCGGCGCCCCTCGAATTCGGCACCGGCTCCGCCGAAGgtacggcatc ... ttcaagccagGGTGCGTATAATGAGTGCGGGTTTCGACAAGCAGATATTGGCTCAGAAGCT
EST: CGCCCCCTCCTAGGCGGCGCCCCTCGAATTCGGCACCGGCTCCGCCGAAG GGTGCGTATAATGAGTGCGGGTTTCGACAAGCAGATATTGGCTCAGAAGCTEST: gi|213171842|gb|FM190942.1|FM190942
genomic: CGCCCCCTCCTAGGCGGCGCCCCTCGAATTCGGCACCGGCTCCGCCGAAGgtacggcatc ... ttcaagccagGGTGCGTATAATGAGTGCGGGTTTCGACAAGCAGATATTGGCTCAGAAGCT
EST: CGCCCCCTCCTAGGCGGCGCCCCTCGAATTCGGCACCGGCTCCGCCGAAGCCAG
genomic: CGCCCCCTCCTAGGCGGCGCCCCTCGAATTCGGCACCGGCTCCGCCG-A---AGgtacggcatc ... ttcaagc
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCTACAAATCCCCGATTAAACCCTAGACTTCCCTCCCCACCCAAATGCGCGCCCCCTCCTAGGCGGCGCCCCTCGAATTCGGCACCGGCTCCGCCGAAGgtacggcatctctcgcgctccgctcgctctattcctgctctgctctggttttgatctagctcgagctcgccggcgctgccgcgttggcgctgtgttgtgt
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