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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AATTTATCTCTGCTTTGCATTAGCATAGGCTCCTGATGAAGAATTTGAAGATTATCTTATTCAACTCATGGGAAATAATTACACTGGTGATCGAAATGAGgtaatctggacttcaagtattaaacttcttgaatgtaaattggcttgtgattgcatgtgcttattctagcaaagtgcactctttttacgagttacctttctctctctctatttttcccag

Basic information

species Zea mays
transcript GRMZM2G145792_T01
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G145792_T01 (Zea mays), 5'ss of exon 1
lower sequence: GLYMA03G34140.1 (Glycine max), 5'ss of exon 11
AATTTATCTCTGCTTTGCATTAGCATAGGCTCCTGATGAAGAATTTGAAGATTATCTTATTCAACTCATGGGAAATAATTACACTGGTGATCGAAATGAGgtaatctggacttcaagtattaaacttcttgaatgtaaattggcttgtgattgcatgtgcttattctagcaaagtg--cactctttttacgagttacctttctctctctctatttttcccag
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----------------------------GCTCCTGATGAAGAATTTGAAGAATATCTCAGGCATATTATTGGTGATCAGTGTACTGGTGACCGAAATGAGgtaattt--acttcagaaaatgtaggttgtttttgggaact--tttgatgtttcccctacacatttcgggtgtgagactaatcttcattttggataccgaggct------------------