1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GAACCGAAGAAGGAATTGGACGCGAGGAGACTCGAGTACTCGACAGGGAAAAGTCGAGGCCTCGGATCCATCGACTCGTGAAGATGTCCTCGCCCGCCGAgtaagtcctcgacacttacagcggtttcatctgatccgagcttcgatctcagattccgacgcgtagacgttgtattgcatggtaggccccgtgattcggg...
species | Zea mays |
transcript | GRMZM2G143817_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AAGTCGAGGCCTCGGATCCATCGACTCGTGAAGATGTCCTCGCCCGCCGA GTACTACAAATCACTTCCACCTATAAGCAAGGCATATGGGACATTGTGTTTEST: gi|6031375|gb|AW076232.1|AW076232
genomic: AAGTCGAGGCCTCGGATCCATCGACTCGTGAAGATGTCCTCGCCCGCCGAgtaagtcctc ... ccttcttcagGTACTACAAATCACTTCCACCTATAAGCAAGGCATATGGGACATTGTGTTT
EST: ACGTCGAGGCCTCGGATCCATCGACTCGTGAAGATGTCTTCGCCCGCCGA GTACTACAAATCACTTCCACCTATAAGCAAGGCATATGGGACATTGTGTTTEST: gi|67017752|gb|CO446501.1|CO446501
genomic: AAGTCGAGGCCTCGGATCCATCGACTCGTGAAGATGTCCTCGCCCGCCGAgtaagtcctc ... ccttcttcagGTACTACAAATCACTTCCACCTATAAGCAAGGCATATGGGACATTGTGTTT
EST: AAGTCGAGGCCTCGGATCCATCGACTCGTGAAGATGTCCTCGCCCGCCGA GTACTACAAATCACTTCCACCTATAAGCAAGGCATATGGGACATTGTGTTTEST: gi|211209280|gb|FL036120.1|FL036120
genomic: AAGTCGAGGCCTCGGATCCATCGACTCGTGAAGATGTCCTCGCCCGCCGAgtaagtcctc ... ccttcttcagGTACTACAAATCACTTCCACCTATAAGCAAGGCATATGGGACATTGTGTTT
EST: AAGTCGAGGCCTCGGATCCATCGACTCGTGAAGATGTCCTCGCCCGCCGA GTACTACAAATCACTTCCACCTATAAGCAAGGCATATGGGACATTGTGTTTEST: gi|211206713|gb|FL036117.1|FL036117
genomic: AAGTCGAGGCCTCGGATCCATCGACTCGTGAAGATGTCCTCGCCCGCCGAgtaagtcctc ... ccttcttcagGTACTACAAATCACTTCCACCTATAAGCAAGGCATATGGGACATTGTGTTT
EST: AAGTCGAGGCCTCGGATCCATCGACTCGTGAAGATGTCCTCGCCCGCCGA GTACTACAAATCACTTCCACCTATAAGCAAGGCATATGGGACATTGTGTTTEST: gi|211209279|gb|FL036119.1|FL036119
genomic: AAGTCGAGGCCTCGGATCCATCGACTCGTGAAGATGTCCTCGCCCGCCGAgtaagtcctc ... ccttcttcagGTACTACAAATCACTTCCACCTATAAGCAAGGCATATGGGACATTGTGTTT
EST: AAGTCGAGGCCTCGGATCCATCGACTCGTGAAGATGTCCTCGCCCGCCGA GTACTACAAATCACTTCCACCTATAAGCAAGGCATATGGGACATTGTGTTT
genomic: AAGTCGAGGCCTCGGATCCATCGACTCGTGAAGATGTCCTCGCCCGCCGAgtaagtcctc ... ccttcttcagGTACTACAAATCACTTCCACCTATAAGCAAGGCATATGGGACATTGTGTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAACCGAAGAAGGAATTGGACGCGAGGAGACTCGAGTACTCGACAGGGAAAAGTCGAGGCCTCGGATCCATCGACTCGTGAAGATGTCCTCGCCCGCCGAgtaagtcctcgacacttacagcggtttcatctgatccgagcttcgatctcagattccgacgcgtagacgttgtattgcatggtaggccccgtgattcggg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG