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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTGTTCTTCGCTGCTTTGGGTTGTGGGGCTTACTTCCTAGCCCCAGTGGGAGTAGTGACTAGCGTTATAGGTCGTTGGGCGGCCAGAAGGTTGCCATGAgtaaggttgggagaccgaaggctgttttccgtgcaccggacacgtag

Basic information

species Zea mays
transcript GRMZM2G141667_T01
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G141667_T01 (Zea mays), 5'ss of exon 1
lower sequence: GLYMA0886S00200.1 (Glycine max), 5'ss of exon 4
TTTGTTCTTCGCTGCTTTGGGTTGTGGGGCTTACTTCCTAGCCCCAGTGGGAGTAGTGACTAGCGTTATAGGTCGTTGGGCGGCCAGAAGGTTGCCATGAgtaagg----ttgggagaccgaaggctgttttccgtgcaccggacacgtag-------------------------------------------------
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TTTGTTCTTCGCCGCTTTGGGTTGTGGGGCTTACTTCCTAGCCCCAGTGGGAGTAGTGACTAGCGTTATAGGTTGTTGGGCGGCCGGAAGGTTGCCACGAgtaagtcagtttgggggaccgaaggctgttctccgtgcaccggacacgtagcttaccgaatccgttgcgacaccgatgggaatgcatgctacgaaagata