1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TGGAAAGGGAGAGCTTGTTGTGGATATTAAGAAGATTCAACGAAGATATATAAGAACTGATTTCTTTGTAGACATACTTGCAGCTGTGCCACTTCCACAGgtaaaggcctcacgaagattagtggctgcagcccttgttgcataatttaattgcttatattgcattttcttattttaccatttttattggtactacaatc...
species | Zea mays |
transcript | GRMZM2G135651_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TAAGAACTGATTTCTTTGTAGACATACTTGCAGCTGTGCCACTTCCACAG GTTACTGTGTGGTTAATTATGCCTGCGATAAAAAGCTCAGATTATAACATCEST: gi|211121718|gb|FL408184.1|FL408184
genomic: TAAGAACTGATTTCTTTGTAGACATACTTGCAGCTGTGCCACTTCCACAGgtaaaggcct ... tgttttgcagGTTACTGTGTGGTTAATTATGCCTGCGATAAAAAGCTCAGATTATAACATC
EST: TAAGAACTGATTTCTTTGTAGACATACTTGCAGCTGTGCCACTTCCACAG GTTACTGTGTGGTTAATTATGCCTGCGATAAAAAGCTCAGATTATAACATCEST: gi|211144364|gb|FL386464.1|FL386464
genomic: TAAGAACTGATTTCTTTGTAGACATACTTGCAGCTGTGCCACTTCCACAGgtaaaggcct ... tgttttgcagGTTACTGTGTGGTTAATTATGCCTGCGATAAAAAGCTCAGATTATAACATC
EST: TAAGAACTGATTTCTTTGTAGACATACTTGCAGCTGTGCCACTTCCACAG GTTACTGTGTGGTTAATTATGCCTGCGATAAAAAGCTCAGATTATAACATCEST: gi|211454499|gb|FL406358.1|FL406358
genomic: TAAGAACTGATTTCTTTGTAGACATACTTGCAGCTGTGCCACTTCCACAGgtaaaggcct ... tgttttgcagGTTACTGTGTGGTTAATTATGCCTGCGATAAAAAGCTCAGATTATAACATC
EST: TAAGAACTGATTTCTTTGTAGACATACTTGCAGCTGTGCCACTTCCACAG GTTACTGTGTGGTTAATTATGCCTGCGATAAAAAGCTCAGATTATAACATCEST: gi|211449426|gb|FL370719.1|FL370719
genomic: TAAGAACTGATTTCTTTGTAGACATACTTGCAGCTGTGCCACTTCCACAGgtaaaggcct ... tgttttgcagGTTACTGTGTGGTTAATTATGCCTGCGATAAAAAGCTCAGATTATAACATC
EST: TAAGAACTGATTTCTTTGTAGACATACTTGCAGCTGTGCCACTTCCACAG GTTACTGTGTGGTTAATTATGCCTGCGATAAAAAGCTCAGATTATAACATCEST: gi|211166323|gb|FL404284.1|FL404284
genomic: TAAGAACTGATTTCTTTGTAGACATACTTGCAGCTGTGCCACTTCCACAGgtaaaggcct ... tgttttgcagGTTACTGTGTGGTTAATTATGCCTGCGATAAAAAGCTCAGATTATAACATC
EST: TAAGAACTGATTTCTTTGTAGACATACTTGCAGCTGTGCCACTTCCACAG GTTACTGTGTGGTTAATTATGCCTGCGATAAAAAGCTCAGATTATAACATCEST: gi|211045888|gb|FL416929.1|FL416929
genomic: TAAGAACTGATTTCTTTGTAGACATACTTGCAGCTGTGCCACTTCCACAGgtaaaggcct ... tgttttgcagGTTACTGTGTGGTTAATTATGCCTGCGATAAAAAGCTCAGATTATAACATC
EST: TAAGAACTGATTTCTTTGTAGACATACTTGCAGCTGTGCCACTTCCACAG GTTACTGTGTGGTTAATTATGCCTGCGATAAAAAGCTCAGATTATAACATCEST: gi|89247510|gb|DY619296.1|DY619296
genomic: TAAGAACTGATTTCTTTGTAGACATACTTGCAGCTGTGCCACTTCCACAGgtaaaggcct ... tgttttgcagGTTACTGTGTGGTTAATTATGCCTGCGATAAAAAGCTCAGATTATAACATC
EST: AAGAACTGATTTCTTTGTAGACATACTTGCAGCTGTGCCACTTCCACAG GTTACTGTGTGGTTAATTATGCCTGCGATAAAAAGCTCAGATTATAACATC
genomic: AAGAACTGATTTCTTTGTAGACATACTTGCAGCTGTGCCACTTCCACAGgtaaaggcct ... tgttttgcagGTTACTGTGTGGTTAATTATGCCTGCGATAAAAAGCTCAGATTATAACATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGAAAGGGAGAGCTTGTTGTGGATATTAAGAAGATTCAACGAAGATATATAAGAACTGATTTCTTTGTAGACATACTTGCAGCTGTGCCACTTCCACAGgtaaaggcctcacgaagattagtggctgcagcccttgttgcataatttaattgcttatattgcattttcttattttaccatttttattggtactacaatc
- - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG