Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|84980803|gb|DW531152.1|DW531152EST: CGCTGAGAAGGCAATCTTCATCTTCGTAAAGAACACCCTCCCACCAACAG CTGCTCTGATGTCTGCCATCTACGAGGAGAACAAGGACGAGGACGGCTTCC
genomic: CGCTGAGAAGGCAATCTTCATCTTCGTAAAGAACACCCTCCCACCAACAGgtaccggaca ... gtccctgcagCTGCTCTGATGTCCGCCATCTACGAGGAGAACAAGGACGAGGACGGCTTCC
EST:
gi|37391661|gb|CF633074.1|CF633074EST: CGCTGAGAAGGCAATCTTCATCTTCGTAAAGAACACCCTCCCACCAACAG CTGCTCTGATGTCCGCCATCTACGAGGAGAACAAGGACGAGGACGGCTTCC
genomic: CGCTGAGAAGGCAATCTTCATCTTCGTAAAGAACACCCTCCCACCAACAGgtaccggaca ... gtccctgcagCTGCTCTGATGTCCGCCATCTACGAGGAGAACAAGGACGAGGACGGCTTCC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTCACAGTCGGACAGTTTGTGTATGTGGTACGGAAGCGGATCAAGCTCAGCGCTGAGAAGGCAATCTTCATCTTCGTAAAGAACACCCTCCCACCAACAGgtaccggacagtagttccttctgttgtcataccagtgttggggaaaaataaaacaaaacctaccacggtgccccccgcccgtaacgttgttgtccctgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC