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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAGGAGCAAAGCGTCGAGACCACAGTGGCCGTCGCCGTCGCTGTCGCCGCCGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacatgtgtgcaccctactagtctagcagttgtgcggtcgcgagatgcctctggttcgcgtaagatctggttgccaatgggctccgcgctttcat...

Basic information

species Zea mays
transcript GRMZM2G133213_T01
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G133213_T01 (Zea mays), 5'ss of exon 1
lower sequence: LOC_Os01g59930.1 (Oryza sativa), 5'ss of exon 1
CAGGAGCAAAGCGTCGAGACCACAGTGGCCGTCGCCGTCGCTGTCGCCGCCGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatgga-----------catgtgtgcaccctactagtctagcagttgtgcggtcgcgagatgcctctggttcgcgtaagatctggttgccaatgggctccgcgctttcat
|| | | | |||||| ||||||| |||||| |||||||||| |||| ||| |||||||| |||||||||||||||||||| || ||||||||||||||||||||| |           ||| ||| | | ||  |||||     |||||| | | | ||  || |      |||||   |||||| |   |      ||||| | |     
CACGGGGAGAGCGTCCAGACCACGGTGGCCATCGCCGTCGCCGTCGTCGCGGTCGCCGCGGGCGGCGCCTTCCTCCTCCTCCGGTCCAGGAAGCCCAAGGgtatgtattggctccgtgcatctgtcccctctgatagtccgat-gttgtgagtttgtgatgtggcggct-ctcgcgcgtgatctgatctgctt----ctccggggt-----
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71448609|gb|DR829659.1|DR829659
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|148941936|gb|EC886923.2|EC886923
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211036824|gb|FL377561.1|FL377561
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|149102560|gb|EE287919.2|EE287919
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211488678|gb|FL428183.1|FL428183
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211092311|gb|FL381169.1|FL381169
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211130984|gb|FL371913.1|FL371913
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211034363|gb|FL377535.1|FL377535
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211022151|gb|FL381481.1|FL381481
EST:     CGTCGCCGCA---SSCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211313714|gb|FL419287.1|FL419287
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGANAACTTCAGGAAGTTCAAACTTGTTGAANAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211070687|gb|FL369860.1|FL369860
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211397544|gb|FL373942.1|FL373942
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|149037731|gb|EE155393.2|EE155393
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|78109074|gb|DV527491.1|DV527491
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211156328|gb|FL378563.1|FL378563
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|148961502|gb|EE012253.2|EE012253
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211490405|gb|FL381898.1|FL381898
EST:     CGTCGCCGCA-SC-GC-NCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211223490|gb|FL386109.1|FL386109
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|76012143|gb|DT939313.1|DT939313
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|149082026|gb|EE171198.2|EE171198
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211156688|gb|FL406074.1|FL406074
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211408063|gb|FL382720.1|FL382720
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211428817|gb|FL393474.1|FL393474
EST:     CGTCGCCGCRGSCN-C---TTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211261098|gb|FL369177.1|FL369177
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211133803|gb|FL389461.1|FL389461
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211156867|gb|FL415211.1|FL415211
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211063699|gb|FL417020.1|FL417020
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|78080766|gb|DV509178.1|DV509178
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211031806|gb|FL374010.1|FL374010
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|67014854|gb|CO443603.1|CO443603
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211323819|gb|FL407925.1|FL407925
EST:     CGTCGCCGC-MGC-GCNCTTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|60395988|gb|DN228858.1|DN228858
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|149081654|gb|EE170805.2|EE170805
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|149080052|gb|EE169070.2|EE169070
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|32915046|gb|CF019858.1|CF019858
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211451633|gb|FL374385.1|FL374385
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|76291174|gb|DV030742.1|DV030742
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211294859|gb|FL410177.1|FL410177
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211518829|gb|FL412112.1|FL412112
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211164628|gb|FL401349.1|FL401349
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|32856318|gb|CD995999.1|CD995999
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGGTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211062814|gb|FL383357.1|FL383357
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211506310|gb|FL378320.1|FL378320
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211231553|gb|FL371571.1|FL371571
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211471318|gb|FL386742.1|FL386742
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211056836|gb|FL382513.1|FL382513
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211076467|gb|FL387317.1|FL387317
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|38688190|gb|CK145221.1|CK145221
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211536313|gb|FL400262.1|FL400262
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|149073961|gb|EE162290.2|EE162290
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211339234|gb|FL411894.1|FL411894
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211376856|gb|FL402406.1|FL402406
EST:     CGTCGCCGCA---SSCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211303371|gb|FL404506.1|FL404506
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|93017180|gb|EB642700.1|EB642700
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|50324318|gb|CO519444.1|CO519444
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211223692|gb|FL399499.1|FL399499
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211129521|gb|FL429574.1|FL429574
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211271215|gb|FL391999.1|FL391999
EST:     CGTCGCCGCA---SSCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|50328082|gb|CO523208.1|CO523208
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211116190|gb|FL414276.1|FL414276
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|58029593|gb|CX725020.1|CX725020
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|148958580|gb|EC904827.2|EC904827
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211215179|gb|FL411862.1|FL411862
EST:     GTCGCCGCAGGCGGCGCCTTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: GTCGCCGCAGGCGGCGCC-TTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211494326|gb|FL423871.1|FL423871
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211373993|gb|FL393860.1|FL393860
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211532834|gb|FL377049.1|FL377049
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211294909|gb|FL412762.1|FL412762
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211205090|gb|FL419141.1|FL419141
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|149073131|gb|EE161405.2|EE161405
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|50332760|gb|CO527886.1|CO527886
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211060115|gb|FL393163.1|FL393163
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211209584|gb|FL394649.1|FL394649
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211382028|gb|FL388795.1|FL388795
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|91051331|gb|EB161749.1|EB161749
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211423431|gb|FL384447.1|FL384447
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211271214|gb|FL391998.1|FL391998
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211439136|gb|FL388407.1|FL388407
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211527632|gb|FL412982.1|FL412982
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|37420514|gb|CF647948.1|CF647948
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211067941|gb|FL369839.1|FL369839
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211109351|gb|FL402581.1|FL402581
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211290231|gb|FL387862.1|FL387862
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211251784|gb|FL389217.1|FL389217
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211144799|gb|FL417397.1|FL417397
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211245226|gb|FL396982.1|FL396982
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211423822|gb|FL403259.1|FL403259
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211159857|gb|FL403886.1|FL403886
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|211269194|gb|FL409750.1|FL409750
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
EST: gi|78117350|gb|DV535737.1|DV535737
EST:     CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGG                         GCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC
genomic: CGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 46 (upstream exon), 49 (downstream exon)
Score: 223

CAGGAGCAAAGCGTCGAGACCACAGTGGCCGTCGCCGTCGCTGTCGCCGCCGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGCAAATAAGTCATAATGTTGCCAGGTTCAAGTTCGCTCTTCCAACTCCAAC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 309

CAGGAGCAAAGCGTCGAGACCACAGTGGCCGTCGCCGTCGCTGTCGCCGCCGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGCAAATAAGTCATAATGTTGCCAGGTTCAAGTTCGCTCTTCCAACTCCAAC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 225

CAGGAGCAAAGCGTCGAGACCACAGTGGCCGTCGCCGTCGCTGTCGCCGCCGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGCAAATAAGTCATAATGTTGCCAGGTTCAAGTTCGCTCTTCCAACTCCAAC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 380

CAGGAGCAAAGCGTCGAGACCACAGTGGCCGTCGCCGTCGCTGTCGCCGCCGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacat ... ttggcattagGCTGCTTGGATCCTGAGAACTTCAGGAAGTTCAAACTTGTTGAAAAGAAGCAAATAAGTCATAATGTTGCCAGGTTCAAGTTCGCTCTTCCAACTCCAAC


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CAGGAGCAAAGCGTCGAGACCACAGTGGCCGTCGCCGTCGCTGTCGCCGCCGTCGCCGCAGGCGGCGCCTTCCTCCTCCTTCGATCCAGGAAGCCCAAGGgtatggacatgtgtgcaccctactagtctagcagttgtgcggtcgcgagatgcctctggttcgcgtaagatctggttgccaatgggctccgcgctttcat

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -caccctac