Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|9952896|gb|BE639479.1|BE639479EST: TCCACCTGGTTACTGTGCCTAGCGCCAAAACTCTTGGAGAGTGGGCTGGG CTTTGCAAGATCGACTCTGAGGGCAAGGCGAGGAAGGTTGTAGGCTGCTCC
genomic: TCCACCTGGTTACTGTGCCTAGCGCCAAAACTCTTGGAGAGTGGGCTGGGgtgagttgaa ... catactgtagCTTTGCAAGATCGACTCTGAGGGCAAGGCGAGGAAGGTTGTAGGCTGCTCC
EST:
gi|211457159|gb|FL092943.1|FL092943EST: TCCACCTGGTTACTGTGCCTAGCGCCAAAACTCTTGGAGAGTGGGCTGGG CTTTGCAAGATCGACTCTGAGGGCAAGGCGAGGAAGGTTGTAGGCTG
genomic: TCCACCTGGTTACTGTGCCTAGCGCCAAAACTCTTGGAGAGTGGGCTGGGgtgagttgaa ... catactgtagCTTTGCAAGATCGACTCTGAGGGCAAGGCGAGGAAGGTTGTAGGCTG
EST:
gi|9254186|gb|BE344654.1|BE344654EST: TCCACCTGGTTACTGTGCCTAGCGCCAAAACTCTTGGAGAGTGGGCTGGG CTTTGCAAGATCGACTCTGAGGGCAAGGCGAGGAAGGTTGTAGGCTGCTCC
genomic: TCCACCTGGTTACTGTGCCTAGCGCCAAAACTCTTGGAGAGTGGGCTGGGgtgagttgaa ... catactgtagCTTTGCAAGATCGACTCTGAGGGCAAGGCGAGGAAGGTTGTAGGCTGCTCC
EST:
gi|4647289|gb|AI622364.1|AI622364EST: TCCCCCTGGTTNTTGTGCCTAGCGCCAAAACTCTTGGAGAGTGGGCTGGG CTTTGCAAGATCGACTCTGAGGGCAAGGCGAGGAAGGTTGTAGGCTGCTCC
genomic: TCCACCTGGTTACTGTGCCTAGCGCCAAAACTCTTGGAGAGTGGGCTGGGgtgagttgaa ... catactgtagCTTTGCAAGATCGACTCTGAGGGCAAGGCGAGGAAGGTTGTAGGCTGCTCC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CCAGCCTGATTATGTCAAGCTGGTGAAGGCTCTCTGCGCTGAGCACAATGTCCACCTGGTTACTGTGCCTAGCGCCAAAACTCTTGGAGAGTGGGCTGGGgtgagttgaacaatgcttcctcagaaatataccttgttttactttgtgtgtctatctcttagacggtcaagcaattaatatggcttacattgttcttcct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA