1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ACCGGCACCGCCTCCCGAGCTCCTGCTCCGCGCGCGTAGCCGCGCCGCAGTTCCCAGTAATAACACGCCCGCAAGCTCCGCAGTCCGCTCCCTGCGCGAGgtaatattgcccctgctctgctgaccggcctccggcacggatcgtctgttggcgtttgtttcttgagccttctggtctgttttgttttccttccattctt...
species | Zea mays |
transcript | GRMZM2G132084_T03 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TTCCCAGTAATAACACGCCCGCAAGCTCCGCAGTCCGCTCCCTGCGCGAG GGTGTTGTTTGAGCCATGAAGATGGCGACGATGACTGCTTACAAGTATCAAEST: gi|78076717|gb|DV505151.1|DV505151
genomic: TTCCCAGTAATAACACGCCCGCAAGCTCCGCAGTCCGCTCCCTGCGCGAGgtaatattgc ... tgtggtgcagGGTGTTGTTTGAGCCATGAAGATGGCGACGATGACTGCTTACAAGTATCAA
EST: TTCCCAGTAATAACACGCCCGCAAGCTCCGCAGTCCGCTCCCTGCGCGAG GGTGTTGTTTGAGCCATGAAGATGGCGACGATGACTGCTTACAAGTATCAAEST: gi|211506260|gb|FL375259.1|FL375259
genomic: TTCCCAGTAATAACACGCCCGCAAGCTCCGCAGTCCGCTCCCTGCGCGAGgtaatattgc ... tgtggtgcagGGTGTTGTTTGAGCCATGAAGATGGCGACGATGACTGCTTACAAGTATCAA
EST: TTCCCAGTAATAACACGCCCGCAAGCTCCGCAGTCCGCTCCCTGCGCGAG GGTGTTGTTTGAGCCATGAAGATGGCGACGATGACTGCTTACAAGTATCAAEST: gi|38687922|gb|CK144953.1|CK144953
genomic: TTCCCAGTAATAACACGCCCGCAAGCTCCGCAGTCCGCTCCCTGCGCGAGgtaatattgc ... tgtggtgcagGGTGTTGTTTGAGCCATGAAGATGGCGACGATGACTGCTTACAAGTATCAA
EST: TTCCCAGTAATAACACGCCCGCAAGCTCCGCAGTCCGCTCCCTGCGCGAG GGTGTTGTTTGAGCCATGAAGATGGCGACGATGACTGCTTACAAGTATCAAEST: gi|101387192|gb|EB815613.1|EB815613
genomic: TTCCCAGTAATAACACGCCCGCAAGCTCCGCAGTCCGCTCCCTGCGCGAGgtaatattgc ... tgtggtgcagGGTGTTGTTTGAGCCATGAAGATGGCGACGATGACTGCTTACAAGTATCAA
EST: TTCCCAGTAATAACACGCCCGCAAGCTCCGCAGTCCGCTCCCTGCGCGAG GGTGTTGTTTGAGCCATGAAGATGGCGACGATGACTGCTTACAAGTATCAA
genomic: TTCCCAGTAATAACACGCCCGCAAGCTCCGCAGTCCGCTCCCTGCGCGAGgtaatattgc ... tgtggtgcagGGTGTTGTTTGAGCCATGAAGATGGCGACGATGACTGCTTACAAGTATCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCGGCACCGCCTCCCGAGCTCCTGCTCCGCGCGCGTAGCCGCGCCGCAGTTCCCAGTAATAACACGCCCGCAAGCTCCGCAGTCCGCTCCCTGCGCGAGgtaatattgcccctgctctgctgaccggcctccggcacggatcgtctgttggcgtttgtttcttgagccttctggtctgttttgttttccttccattctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT