1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
TTAATCTCGCGTAGCCTCACCGTCCGCGCAGTTCAACGTCCCGGATCTCCGCGTCGGCACCCTCGACTCGCTCCTCGCGCTCAGTGACGACCTCGTCAAGgttccccgcacgatctcgatcccctctcccctctccagctgccccggggcactagcctctgattccgtgccatcgtgtgtttgtctctatatgtatacccgcag
species | Zea mays |
transcript | GRMZM2G128995_T03 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCGTCGGCACCCTCGACTCGCTCCTCGCGCTCAGTGACGACCTCGTCAAG TCCAATGTCTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|6095541|gb|AW120208.1|AW120208
genomic: GCGTCGGCACCCTCGACTCGCTCCTCGCGCTCAGTGACGACCTCGTCAAGgttccccgca ... atacccgcagTCCAATGTCTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTCCTCGCGCTCAGTGACGACCTCGTCAAG TCCAATGTCTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|211113996|gb|FK980568.1|FK980568
genomic: GCGTCGGCACCCTCGACTCGCTCCTCGCGCTCAGTGACGACCTCGTCAAGgttccccgca ... atacccgcagTCCAATGTCTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTCCTCGCGCTCAGTGACGACCTCGTCAAG TCCAATGTCTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|211113211|gb|FK980564.1|FK980564
genomic: GCGTCGGCACCCTCGACTCGCTCCTCGCGCTCAGTGACGACCTCGTCAAGgttccccgca ... atacccgcagTCCAATGTCTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTCCTCGCGCTCAGTGACGACCTCGTCAAG TCCAATGTCTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|211113213|gb|FK980566.1|FK980566
genomic: GCGTCGGCACCCTCGACTCGCTCCTCGCGCTCAGTGACGACCTCGTCAAGgttccccgca ... atacccgcagTCCAATGTCTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTCCTCGCGCTCAGTGACGACCTCGTCAAG TCCAATGTCTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
genomic: GCGTCGGCACCCTCGACTCGCTCCTCGCGCTCAGTGACGACCTCGTCAAGgttccccgca ... atacccgcagTCCAATGTCTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTAATCTCGCGTAGCCTCACCGTCCGCGCAGTTCAACGTCCCGGATCTCCGCGTCGGCACCCTCGACTCGCTCCTCGCGCTCAGTGACGACCTCGTCAAGgttccccgcacgatctcgatcccctctcccctctccagctgccccggggcactagcctctgattccgtgccatcgtgtgtttgtctctatatgtatacccgcag
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