Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAGCTTGGGTCTCCTATCCTCCCCACCCCTCTCTCGGTCTCTTCCCCACCGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgccgagatctccttttcttgcgtgcttcatcacgccaggctcgtcccggtgactggctggttttggctctgggttgtcggctccggcctccg...

Basic information

species Zea mays
transcript GRMZM2G124434_T01
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211471379|gb|FL049788.1|FL049788
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|148941150|gb|EC886023.2|EC886023
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|149075250|gb|EE163754.2|EE163754
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|13316155|gb|BG410602.1|BG410602
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|148986030|gb|EE029877.2|EE029877
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211471370|gb|FL049779.1|FL049779
EST:     CGTGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|71303010|gb|DR787616.1|DR787616
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|148944625|gb|EC889756.2|EC889756
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|148974477|gb|EE025259.2|EE025259
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211468840|gb|FL049767.1|FL049767
EST:     CGTGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|22545376|gb|BU097735.1|BU097735
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|149074869|gb|EE163309.2|EE163309
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211463790|gb|FL049745.1|FL049745
EST:     CGTGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|149077964|gb|EE166695.2|EE166695
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211468849|gb|FL049776.1|FL049776
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211466323|gb|FL049759.1|FL049759
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|149085930|gb|EE175457.2|EE175457
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211466313|gb|FL049749.1|FL049749
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|76014792|gb|DT941962.1|DT941962
EST:     GTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: GTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211471384|gb|FL049793.1|FL049793
EST:     CGCTTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211471375|gb|FL049784.1|FL049784
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|50334752|gb|CO529878.1|CO529878
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|148948429|gb|EC893946.2|EC893946
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|148943841|gb|EC888919.2|EC888919
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211473901|gb|FL049795.1|FL049795
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|149080013|gb|EE169034.2|EE169034
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211463787|gb|FL049742.1|FL049742
EST:     CGTGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|148943579|gb|EC888642.2|EC888642
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211471373|gb|FL049782.1|FL049782
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|149004990|gb|EE039510.2|EE039510
EST:     GTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: GTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|71432081|gb|DR813131.1|DR813131
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211463783|gb|FL049738.1|FL049738
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211468839|gb|FL049766.1|FL049766
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211471380|gb|FL049789.1|FL049789
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|101393240|gb|EB818551.1|EB818551
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|13316156|gb|BG410603.1|BG410603
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211466316|gb|FL049752.1|FL049752
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211468837|gb|FL049764.1|FL049764
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCCTACGGC-AGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211468841|gb|FL049768.1|FL049768
EST:     CGTGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACNTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211468838|gb|FL049765.1|FL049765
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|22545833|gb|BU098207.1|BU098207
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCCTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|30031706|gb|CB833557.1|CB833557
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211463791|gb|FL049746.1|FL049746
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211468842|gb|FL049769.1|FL049769
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|31353274|gb|CD437631.1|CD437631
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|149004882|gb|EE039392.2|EE039392
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211473900|gb|FL049794.1|FL049794
EST:     TTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: TTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211471378|gb|FL049787.1|FL049787
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATBGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211466326|gb|FL049762.1|FL049762
EST:     CGTGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211468845|gb|FL049772.1|FL049772
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211468844|gb|FL049771.1|FL049771
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|148959388|gb|EE010762.2|EE010762
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211466319|gb|FL049755.1|FL049755
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211466322|gb|FL049758.1|FL049758
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|71766426|gb|DR964363.1|DR964363
EST:     GTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: GTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211468851|gb|FL049778.1|FL049778
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211468848|gb|FL049775.1|FL049775
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211471377|gb|FL049786.1|FL049786
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211471372|gb|FL049781.1|FL049781
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGWAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211466325|gb|FL049761.1|FL049761
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211468850|gb|FL049777.1|FL049777
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAG-NGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|78110081|gb|DV528496.1|DV528496
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|148940561|gb|EC885363.2|EC885363
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211466327|gb|FL049763.1|FL049763
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|148930700|gb|EC872950.2|EC872950
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|149087879|gb|EE177150.2|EE177150
EST:     CGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|76284993|gb|DV024561.1|DV024561
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|71436318|gb|DR817368.1|DR817368
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|148932049|gb|EC875384.2|EC875384
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|31361616|gb|CD445973.1|CD445973
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|71766875|gb|DR964812.1|DR964812
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|74242204|gb|DT650118.1|DT650118
EST:     CTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211463784|gb|FL049739.1|FL049739
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|76017298|gb|DT944468.1|DT944468
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|71769936|gb|DR967873.1|DR967873
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|6636925|gb|AW261197.1|AW261197
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|149099241|gb|EE185272.2|EE185272
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211466315|gb|FL049751.1|FL049751
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211466324|gb|FL049760.1|FL049760
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211463786|gb|FL049741.1|FL049741
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211463792|gb|FL049747.1|FL049747
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211466314|gb|FL049750.1|FL049750
EST:     CGCGTCTTNGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGAC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGAC
EST: gi|78116195|gb|DV534582.1|DV534582
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211468846|gb|FL049773.1|FL049773
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|211471374|gb|FL049783.1|FL049783
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|71429280|gb|DR810330.1|DR810330
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|76282387|gb|DV021955.1|DV021955
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
EST: gi|76937291|gb|DV175101.1|DV175101
EST:     CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAG                         AATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC
genomic: CGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 160

GAAGCTTGGGTCTCCTATCCTCCCCACCCCTCTCTCGGTCTCTTCCCCACCGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGCTGAGCTGGAGAGGGAGCCCTACTGGCCGAGTGAGAAGCTGAGGATTTCG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 543

GAAGCTTGGGTCTCCTATCCTCCCCACCCCTCTCTCGGTCTCTTCCCCACCGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGCTGAGCTGGAGAGGGAGCCCTACTGGCCGAGTGAGAAGCTGAGGATTTCG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 439

GAAGCTTGGGTCTCCTATCCTCCCCACCCCTCTCTCGGTCTCTTCCCCACCGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGCTGAGCTGGAGAGGGAGCCCTACTGGCCGAGTGAGAAGCTGAGGATTTCG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 253

GAAGCTTGGGTCTCCTATCCTCCCCACCCCTCTCTCGGTCTCTTCCCCACCGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgc ... caaatgacagAATGGGGAGCAGCGAGAAGACCGTTACCGCTTACGGCGAGTACACCTACGCTGAGCTGGAGAGGGAGCCCTACTGGCCGAGTGAGAAGCTGAGGATTTCG


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GAAGCTTGGGTCTCCTATCCTCCCCACCCCTCTCTCGGTCTCTTCCCCACCGCGTCTTCGTCGTCTCGTCTTCCTGCCTCCTTCGCCCGAGAAAGGAGAGgtaagcccgccgagatctccttttcttgcgtgcttcatcacgccaggctcgtcccggtgactggctggttttggctctgggttgtcggctccggcctccg

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cggcctcc