Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|211125807|gb|FL321198.1|FL321198EST: TCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGCGGGAAGG ATATATTTCCTGGGACGACTACTTCATGGCGATCGCCTTCCTTTCGGCTGA
genomic: TCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGAGGGAAGGgttcgtcaat ... gtttgtgcagATATATTTCCTGGGACGACTACTTCATGGCGATCGCCTTCCTTTCGGCTGA
EST:
gi|211359478|gb|FL332719.1|FL332719EST: TCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGAGGGAAGG ATATATTTCCTGGGACGACTACTTCATGGCGATCGCCTTCCTTTCGGCTGA
genomic: TCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGAGGGAAGGgttcgtcaat ... gtttgtgcagATATATTTCCTGGGACGACTACTTCATGGCGATCGCCTTCCTTTCGGCTGA
EST:
gi|211477981|gb|FL231676.1|FL231676EST: TCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGAGGGAAGG ATATATTTCCTGGGACGACTACTTCATGGCGATCGCCTTCCTTTCGGCTGA
genomic: TCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGAGGGAAGGgttcgtcaat ... gtttgtgcagATATATTTCCTGGGACGACTACTTCATGGCGATCGCCTTCCTTTCGGCTGA
EST:
gi|71298203|gb|DR785078.1|DR785078EST: TCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGAGGGAAGG ATATATTTCCTGGGACGACTACTTCATGGCGATCGCCTTCCTTTCGGCTGA
genomic: TCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGAGGGAAGGgttcgtcaat ... gtttgtgcagATATATTTCCTGGGACGACTACTTCATGGCGATCGCCTTCCTTTCGGCTGA
EST:
gi|211477980|gb|FL231675.1|FL231675EST: TCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGAGGGAAGG ATATATTTCCTGGGACGACTACTTCATGGCGATCGCCTTCCTTTCGGCTGA
genomic: TCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGAGGGAAGGgttcgtcaat ... gtttgtgcagATATATTTCCTGGGACGACTACTTCATGGCGATCGCCTTCCTTTCGGCTGA
EST:
gi|211477983|gb|FL231678.1|FL231678EST: TCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGAGGGAAGS ATATATTTCCTGGGACGACTACTTCATGGCGATCGCCTTCCTTTCGGCTGA
genomic: TCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGAGGGAAGGgttcgtcaat ... gtttgtgcagATATATTTCCTGGGACGACTACTTCATGGCGATCGCCTTCCTTTCGGCTGA
EST:
gi|211477979|gb|FL231674.1|FL231674EST: TCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGAGGGAAGG ATATATTTCCTGGGACGACTACTTCATGGCGATCGCCTTCCTTTCGGCTGA
genomic: TCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGAGGGAAGGgttcgtcaat ... gtttgtgcagATATATTTCCTGGGACGACTACTTCATGGCGATCGCCTTCCTTTCGGCTGA
EST:
gi|211477985|gb|FL231680.1|FL231680EST: TCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGAGGGAAGG ATATATTTCCTGGGACGACTACTTCATGGCGATCGCCTTCCTTTCGGCTGA
genomic: TCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGAGGGAAGGgttcgtcaat ... gtttgtgcagATATATTTCCTGGGACGACTACTTCATGGCGATCGCCTTCCTTTCGGCTGA
EST:
gi|211477978|gb|FL231673.1|FL231673EST: TCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGAGGGAAGG ATATATTTCCTGGGACGACTACTTCATGGCGATCGCCTTCCTTTCGGCTGA
genomic: TCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGAGGGAAGGgttcgtcaat ... gtttgtgcagATATATTTCCTGGGACGACTACTTCATGGCGATCGCCTTCCTTTCGGCTGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CATCCTCCGTCAGACCCCAGAACCTCCCCGCCGCCGCTAACGGATCTGCCTCCGAGCGCCCGCTGGCTCAGTCCCCCTTCGATCCTGTCAAGAGGGAAGGgttcgtcaatgttctcccgccctcgttagcgatccttatgccagtccgctcgtcttgagtctcctgtgcagattcgtggcgcttgtttgtgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG