1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GCGGCGGCGACGGCGCCGAGCCTCCTCCGAGTCCTCCTTGCCTTGCACTGCGGGGTGCTGTTCCTGCAATGCTCGGCAGCATCTGCCATGGGCGGCGACGgtgagtgctctcgcctttctttcttcttggctcccgtcttgtttttacataatctgggctcccctgccgctgggaagcatgttccaatttctttcctttc...
species | Zea mays |
transcript | GRMZM2G119759_T03 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCTTAGACTTGGCCATGACGAGGCACTGTGCTGAGGCGGCGGCGGCGACGGCGCCGAGCCTCCTCCGAGTCCTCCTTGCCTTGCACTGCGGGGTGCTGTTCCTGCAATGCTCGGCAGCATCTGCCAEST: gi|91050219|gb|EB160637.1|EB160637
genomic: GCTTAGACTTGGCCATGACGAGGCACTGTGCTGAGGCGGCGGCGGCGACGGCGCCGAGCCTCCTCCGAGTCCTCCTTGCCTTGCACTGCGGGGTGCTGTTCCTGCAATGCTCGGCAGCATCTGCCA
EST: GCTTAGACTTGGCCATGACGAGGCACTGTGCTGAGGCGGCGGCGGCGACGGCGCCGAGCCTCCTCCGAGTCCTCCTTGCCTTGCACTGCGGGGTGCTGTTCCTGCAATGCTCGGCAGCATCTGCCAEST: gi|149051627|gb|EE155737.2|EE155737
genomic: GCTTAGACTTGGCCATGACGAGGCACTGTGCTGAGGCGGCGGCGGCGACGGCGCCGAGCCTCCTCCGAGTCCTCCTTGCCTTGCACTGCGGGGTGCTGTTCCTGCAATGCTCGGCAGCATCTGCCA
EST: GCTTAGACTTGGCCATGACGAGGCACTGTGCTGAGGCGGCGGCGGCGACGGCGCCGAGCCTCCTCCGAGTCCTCCTTGCCTTGCACTGCGGGGTGCTGTTCCTGCAATGCTCGGCAGCATCTGCCAEST: gi|88757284|gb|DY541425.1|DY541425
genomic: GCTTAGACTTGGCCATGACGAGGCACTGTGCTGAGGCGGCGGCGGCGACGGCGCCGAGCCTCCTCCGAGTCCTCCTTGCCTTGCACTGCGGGGTGCTGTTCCTGCAATGCTCGGCAGCATCTGCCA
EST: GCTTAGACTTGGCCATGACGAGGCACTGTGCTGAGGCGGCGGCGGCGACGGCGCCGAGCCTCCTCCGAGTCCTCCTTGCCTTGCACTGCGGGGTGCTGTTCCTGCAATGCTCGGCAGCATCTGCCAEST: gi|88752886|gb|DY537027.1|DY537027
genomic: GCTTAGACTTGGCCATGACGAGGCACTGTGCTGAGGCGGCGGCGGCGACGGCGCCGAGCCTCCTCCGAGTCCTCCTTGCCTTGCACTGCGGGGTGCTGTTCCTGCAATGCTCGGCAGCATCTGCCA
EST: GCTTAGACTTGGCCATGACGAGGCACTGTGCTGAGGCGGCGGCGGCGACGGCGCCGAGCCTCCTCCGAGTCCTCCTTGCCTTGCACTGCGGGGTGCTGTTCCTGCAATGCTCGGCAGCATCTGCCA
genomic: GCTTAGACTTGGCCATGACGAGGCACTGTGCTGAGGCGGCGGCGGCGACGGCGCCGAGCCTCCTCCGAGTCCTCCTTGCCTTGCACTGCGGGGTGCTGTTCCTGCAATGCTCGGCAGCATCTGCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGGCGGCGACGGCGCCGAGCCTCCTCCGAGTCCTCCTTGCCTTGCACTGCGGGGTGCTGTTCCTGCAATGCTCGGCAGCATCTGCCATGGGCGGCGACGgtgagtgctctcgcctttctttcttcttggctcccgtcttgtttttacataatctgggctcccctgccgctgggaagcatgttccaatttctttcctttc
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