Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|211501817|gb|FL043374.1|FL043374EST: CCGCCGCCCGTAAAGAAGAAGTCACCGGCGGAGGAGGAGGCCGAGAAGAG GAGGAAGAAGCTTACACCTGGGAGCTTAATGAAGGGCATTATACGGTCTGG
genomic: CCGCCGCCCGTAAAGAAGAAGTCACCGGCGGAGGAGGAGGCCGAGAAGAGgtcagtccca ... tgcactgcagGAGGAAGAAGCTTACACCTGGGAGCTTAATGAAGGGCATTATACGGTCTGG
EST:
gi|211501818|gb|FL043375.1|FL043375EST: CCGCCGCCCGTAAAGAAGAAGTCACCGGCGGAGGAGGAGGCCGAGAAGAG GAGGAAGAAGCTTACACCTGGGAGCTTAATGAAGGGCATTATACGGTCTGG
genomic: CCGCCGCCCGTAAAGAAGAAGTCACCGGCGGAGGAGGAGGCCGAGAAGAGgtcagtccca ... tgcactgcagGAGGAAGAAGCTTACACCTGGGAGCTTAATGAAGGGCATTATACGGTCTGG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTATAGCTTCGGCCATGGCCCAAGATGCCGGCGACGGCGGTGGGGAACTCCCGCCGCCCGTAAAGAAGAAGTCACCGGCGGAGGAGGAGGCCGAGAAGAGgtcagtcccagttcgccccctcggggttccgaagcatgcagggtcgaattgcgggacttagtatttgtttccattattaatccggctgtagaattttgcaattcagacattcctttcgttcgttgaactactgctgcttgcttgtgatcacgccatgtttctgttgcactgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG