Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|60340892|gb|DN207865.1|DN207865EST: CCTTCATGTTACTTGGGGACTTCAACGATGCAAGGAATGATTTTGAGAAG ATGATTACCATTGACAAGTCATCAGAACAGGACGCTACAGCTGCCCTCCTT
genomic: CCTTCATGTTACTTGGGGACTTCAACGATGCAAGGAATGATTTTGAGAAGgtcaacgaca ... cttattgtagATGATTACCATTGACAAGTCATCAGAACAGGACGCTACAGCTGCCCTCCTT
EST:
gi|60401186|gb|DN233993.1|DN233993EST: CCTTCATGTTACTTGGGGACTTCAACGATGCAAGGAATGATTTTGAGAAG ATGATTACCATTGACAAGTCATCAGAACAGGACGCTACAGCTGCCCTCCTT
genomic: CCTTCATGTTACTTGGGGACTTCAACGATGCAAGGAATGATTTTGAGAAGgtcaacgaca ... cttattgtagATGATTACCATTGACAAGTCATCAGAACAGGACGCTACAGCTGCCCTCCTT
EST:
gi|30032252|gb|CB834103.1|CB834103EST: CCTTCATGTTACTTGGGGACTTCAACGATGCNAGGAATGATTTTGAGAAG ATGATTACCATTGACAAGTCATCAGAACAGGACGCTACAGCTGCCCTCCTT
genomic: CCTTCATGTTACTTGGGGACTTCAACGATGCAAGGAATGATTTTGAGAAGgtcaacgaca ... cttattgtagATGATTACCATTGACAAGTCATCAGAACAGGACGCTACAGCTGCCCTCCTT
EST:
gi|60356003|gb|DN222976.1|DN222976EST: CCTTCATGTTACTTGGGGACTTCAACGATGCAAGGAATGATTTTGAGAAG ATGATTACCATTGACAAGTCATCAGAACAGGACGCTACAGCTGCCCTCCTT
genomic: CCTTCATGTTACTTGGGGACTTCAACGATGCAAGGAATGATTTTGAGAAGgtcaacgaca ... cttattgtagATGATTACCATTGACAAGTCATCAGAACAGGACGCTACAGCTGCCCTCCTT
EST:
gi|60396895|gb|DN229714.1|DN229714EST: CCTTCATGTTACTTGGGGACTTCAACGATGCAAGGAATGATTTTGAGAAG ATGATTACCATTGACAAGTCATCAGAACAGGACGCTACAGCTGCCCTCCTT
genomic: CCTTCATGTTACTTGGGGACTTCAACGATGCAAGGAATGATTTTGAGAAGgtcaacgaca ... cttattgtagATGATTACCATTGACAAGTCATCAGAACAGGACGCTACAGCTGCCCTCCTT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GCTGGACGCAAATCCCGTGCATGTGAAAGCTCTTTACCGCCGAGGAACGTCCTTCATGTTACTTGGGGACTTCAACGATGCAAGGAATGATTTTGAGAAGgtcaacgacaccatactcgagtgccatgtttaaatttatgtcactgccctagtcaacatgtgattgcattatcttattgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA