ERISdb: a Database of Plant Splice Sites

General
Orthologs
EST
RNA-Seq
cis-regulatory elements

Sequence

atgc intronic sequence ATGC exonic sequence

GTGCTCCCTCCAGTCCGACGTCAGGGACGTCGCCAGCAAGTGCGTCGACGCCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataagataagcgtgcattatcagcaagcttacgcttacctgtgcctgctcctcaacaacgtcgatcgaagctgatgacacgtgtgtgcgcag

Basic information

species	Zea mays
transcript	GRMZM2G113349_T01
intron #	1
splice site	5'
intron type	U2

Orthologous splice sites

atgc intronic sequence ATGC exonic sequence

upper sequence: GRMZM2G113349_T01 (Zea mays), 5'ss of exon 1
lower sequence: LOC_Os01g31690.1 (Oryza sativa), 5'ss of exon 1

GTGCTCCCTCCAGTCCGACGTCAGGGACGTCGCCAGCAAGTGCGTCGACGCCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataagataagcgtgcattatcagcaagcttacgcttacctgtgcctgctcctcaacaacgtcgatcgaa--gctg---atgacacgt-gtgtgcgcag----------------
||||||||| ||||||||| || |||| ||||||| |||||||| ||| ||||||||||||||||||||||| ||||||||||| || || ||||||||||||||      || ||  |   |||  || | | |        ||   |||    ||          ||||||||   ||    |||  |||  |||   |  |                
GTGCTCCCTGCAGTCCGACATCCGGGAGGTCGCCAACAAGTGCGCCGATGCCGCCAAGCTCGCCGGCTTCGCCCTCGCCACCTCAGCTCTGCTCGTCTCGgtaagaccttaattaggat---ttaggagtatgttgcatggcgccatggccaaggccaaggtggaaacgatcgaattactatatatgtaacgccgtgcatgtggtggccggccggtgtag

upper sequence: GRMZM2G113349_T01 (Zea mays), 5'ss of exon 1
lower sequence: Vv18s0001g11710.t01 (Vitis vinifera), 5'ss of exon 1

GTGCTCCCTCCAGTCCGACGTCAGGGACGTCGCCAGCAAGTGCGTCGACGCCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataagataagcgtgcattatcagcaagcttacgcttacc-tgtgcctgctcctcaacaacgtcgatcgaagctgatgacacgtgtgtgcgcag----
 |||||||||||  |  | |||| |||  | ||    ||||||| ||| ||||||||| | ||||||||||| ||||||||||| ||  |||| ||||||||| |  |  | | |||   | ||   |      || |  ||    |      | ||  |    |   |  ||| |  |    ||  || |    | ||    
TTGCTCCCTCCAAACTCATGTCAAGGATTTGGCTCAAAAGTGCGCCGATGCCGCCAAGATTGCCGGCTTCGCTCTCGCCACCTCCGCCTTCCTTGTCTCGgtatggct--gctgagctcacgtttctaattgtttttcattttttatccaaaaggtcggcgtttat-cctgtcggacgtttgaactggttttcttgtagatgg

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments

ATGC    EST sequence
ATGC    genomic sequence (exon)
ATGC    genomic sequence (truncated intron)

EST: gi|101401882|gb|EB822574.1|EB822574

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211195771|gb|FL225613.1|FL225613

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211289332|gb|FL225650.1|FL225650

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|91051469|gb|EB161887.1|EB161887

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|71447240|gb|DR828290.1|DR828290

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211289322|gb|FL225640.1|FL225640

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|71446158|gb|DR827208.1|DR827208

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|78081166|gb|DV509578.1|DV509578

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211289324|gb|FL225642.1|FL225642

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGA-CGCGGNAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCA
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGG-AGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCA

EST: gi|149045369|gb|EE047793.2|EE047793

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|71435782|gb|DR816832.1|DR816832

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|148959246|gb|EE010677.2|EE010677

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211287182|gb|FL225629.1|FL225629

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|71771792|gb|DR969729.1|DR969729

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211195770|gb|FL225612.1|FL225612

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCSACCTCGGCGCTCCTCGTCTCG                         GGCGCGA-CGCGGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCA
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGG-AGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCA

EST: gi|71430736|gb|DR811786.1|DR811786

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|37416682|gb|CF645994.1|CF645994

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCA
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCA

EST: gi|78114621|gb|DV533009.1|DV533009

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|93016791|gb|EB642311.1|EB642311

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211287175|gb|FL225622.1|FL225622

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCKGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|149111444|gb|EE294946.2|EE294946

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211287178|gb|FL225625.1|FL225625

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211287184|gb|FL225631.1|FL225631

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211287186|gb|FL225633.1|FL225633

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211195776|gb|FL225618.1|FL225618

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211289331|gb|FL225649.1|FL225649

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211289330|gb|FL225648.1|FL225648

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|101401885|gb|EB822575.1|EB822575

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|149097598|gb|EE183490.2|EE183490

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|71764741|gb|DR962678.1|DR962678

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211287177|gb|FL225624.1|FL225624

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211291464|gb|FL225655.1|FL225655

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211195778|gb|FL225620.1|FL225620

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGA-CGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211289328|gb|FL225646.1|FL225646

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|78085168|gb|DV513561.1|DV513561

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|71429924|gb|DR810974.1|DR810974

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|76282895|gb|DV022463.1|DV022463

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|71757687|gb|DR955624.1|DR955624

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211289323|gb|FL225641.1|FL225641

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGA-CGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211195774|gb|FL225616.1|FL225616

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|88756871|gb|DY541012.1|DY541012

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|50332385|gb|CO527511.1|CO527511

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211289326|gb|FL225644.1|FL225644

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|71426148|gb|DR807198.1|DR807198

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|149096253|gb|EE181961.2|EE181961

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|94474251|gb|EB703209.1|EB703209

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|37418902|gb|CF647124.1|CF647124

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211195773|gb|FL225615.1|FL225615

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCNCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211287180|gb|FL225627.1|FL225627

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|15590019|gb|BI674635.1|BI674635

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|74245621|gb|DT653535.1|DT653535

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211287188|gb|FL225635.1|FL225635

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGG-CACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|76931642|gb|DV172782.1|DV172782

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211195777|gb|FL225619.1|FL225619

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|89250756|gb|DY622542.1|DY622542

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211287189|gb|FL225636.1|FL225636

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGA-CGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|149089850|gb|EE179129.2|EE179129

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211289325|gb|FL225643.1|FL225643

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|76292164|gb|DV031732.1|DV031732

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211287179|gb|FL225626.1|FL225626

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|149110085|gb|EE293901.2|EE293901

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|149014684|gb|EE044354.2|EE044354

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|148944359|gb|EC889460.2|EC889460

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211195779|gb|FL225621.1|FL225621

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGASCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|89249254|gb|DY621040.1|DY621040

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|149070635|gb|EE159045.2|EE159045

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|101384286|gb|EB814187.1|EB814187

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|78103731|gb|DV522159.1|DV522159

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|148973300|gb|EE024383.2|EE024383

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|148946666|gb|EC891928.2|EC891928

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|50330724|gb|CO525850.1|CO525850

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|149103721|gb|EE289127.2|EE289127

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211289320|gb|FL225638.1|FL225638

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCSACCTCGGCGCTCCTCGTCTCG                         GGCGCGAS-GCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|71768846|gb|DR966783.1|DR966783

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211289329|gb|FL225647.1|FL225647

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|76285761|gb|DV025329.1|DV025329

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|211289327|gb|FL225645.1|FL225645

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|78114439|gb|DV532828.1|DV532828

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

EST: gi|91051961|gb|EB162379.1|EB162379

EST:     CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCG                         GGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG
genomic: CCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAG

RNA-Seq data

ATGC Supported by RNA-Seq exonic block that spans over the splice site

atgs Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.

Found data for 4 RNA-Seq libraries.

Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 63

GTGCTCCCTCCAGTCCGACGTCAGGGACGTCGCCAGCAAGTGCGTCGACGCCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataa ... gtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAGAGCAAGACGTACCTGGAGGTGAAGGGCACGGGCACGGCGAACCAGTGCC

Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1383

Block sizes: 48 (upstream exon), 49 (downstream exon)
Score: 8

Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 405

Putative cis-regulatory sequences

atgc	intron	ATGC	exonic elements by Pertea et al.
ATGC	exon	atgc	putative intronic elements
		ATGC	putative exonic elements identified for retained introns

        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTGCTCCCTCCAGTCCGACGTCAGGGACGTCGCCAGCAAGTGCGTCGACGCCGCCAAGCTCGCCGGCTTCGCGCTCGCCACCTCGGCGCTCCTCGTCTCGgtaagtataagataagcgtgcattatcagcaagcttacgcttacctgtgcctgctcctcaacaacgtcgatcgaagctgatgacacgtgtgtgcgcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC