1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
CCGATCCCCGAGAGTTCCATGGACTCGCCTTCCGCATCGAGGTATTAGCAAGCCTCGCCGCGTCGCGCCGCACTGCCCCGCCCCGACGCCTGCTGCGCTGgttcgtctcggttccccaccctcagcgttcggtatgattctagcgtagagtccgcggtccgaattcgtggggtattgctctggaaattgccttcttatgt...
species | Zea mays |
transcript | GRMZM2G111737_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AGCCTCGCCGCGTCGCG-C-CACTGCNCCGCCCCGACGCCTGCTGCGCTG GTTTTGGAAGGATCCAAGATGGGTGTAATCAGCACAGTGCTTGGTTTCTTTEST: gi|211182116|gb|FL037402.1|FL037402
genomic: AGCCTCGCCGCGTCGCGCCGCACTGCCCCGCCCCGACGCCTGCTGCGCTGgttcgtctcg ... tggtctgcagGTTTTGGAAGGATCCAAGATGGGTGTAATCAGCACAGTGCTTGGTTTCTTT
EST: AGCCTCGCCGCGTCGCGCCGCACTGCCCCGCCCCGACGCCTGCTGCGCTG GTTTTGGAAGGATCCAAGATGGGTGTAATCAGCACAGTGCTTGGTTTCTTTEST: gi|211182112|gb|FL037398.1|FL037398
genomic: AGCCTCGCCGCGTCGCGCCGCACTGCCCCGCCCCGACGCCTGCTGCGCTGgttcgtctcg ... tggtctgcagGTTTTGGAAGGATCCAAGATGGGTGTAATCAGCACAGTGCTTGGTTTCTTT
EST: AGCCTCGCCGCGTCGCGCCGCACTGCCCCGCCCCGACGCCTGCTGCGCTG GTTTTGGAAGGATCCAAGATGGGTGTAATCAGCACAGTGCTTGGTTTCTTTEST: gi|211182115|gb|FL037401.1|FL037401
genomic: AGCCTCGCCGCGTCGCGCCGCACTGCCCCGCCCCGACGCCTGCTGCGCTGgttcgtctcg ... tggtctgcagGTTTTGGAAGGATCCAAGATGGGTGTAATCAGCACAGTGCTTGGTTTCTTT
EST: AGCCTCGCCGCGTCGCGCCGCACTGCCCCGCCCCGACGCCTGCTGCGCTG GTTTTGGAAGGATCCAAGATGGGTGTAATCAGCACAGTGCTTGGTTTCTTTEST: gi|211182114|gb|FL037400.1|FL037400
genomic: AGCCTCGCCGCGTCGCGCCGCACTGCCCCGCCCCGACGCCTGCTGCGCTGgttcgtctcg ... tggtctgcagGTTTTGGAAGGATCCAAGATGGGTGTAATCAGCACAGTGCTTGGTTTCTTT
EST: AGCCTCGCCGCGTCGCG-C-CACTGCNCCGCCCCGACGCCTGCTGCGCTG GTTTTGGAAGGATCCAAGATGGGTGTAATCAGCACAGTGCTTGGTTTCTTTEST: gi|211182111|gb|FL037397.1|FL037397
genomic: AGCCTCGCCGCGTCGCGCCGCACTGCCCCGCCCCGACGCCTGCTGCGCTGgttcgtctcg ... tggtctgcagGTTTTGGAAGGATCCAAGATGGGTGTAATCAGCACAGTGCTTGGTTTCTTT
EST: AGCCTCGCCGCGTCGCGCCGCACTGCCCCGCCCCGACGCCTGCTGCGCTG GTTTTGGAAGGATCCAAGATGGGTGTAATCAGCACAGTGCTTGGTTTCTTT
genomic: AGCCTCGCCGCGTCGCGCCGCACTGCCCCGCCCCGACGCCTGCTGCGCTGgttcgtctcg ... tggtctgcagGTTTTGGAAGGATCCAAGATGGGTGTAATCAGCACAGTGCTTGGTTTCTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCGATCCCCGAGAGTTCCATGGACTCGCCTTCCGCATCGAGGTATTAGCAAGCCTCGCCGCGTCGCGCCGCACTGCCCCGCCCCGACGCCTGCTGCGCTGgttcgtctcggttccccaccctcagcgttcggtatgattctagcgtagagtccgcggtccgaattcgtggggtattgctctggaaattgccttcttatgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccccacc