1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATCGTCAAGCTCGTCCCGCACAAGCGCCCGCCGCCGCCGCCGCCCGACCAGTACACGCAGGCGCTGCACAAGGCGCTCATGTTCTTCAACGCGCAGCGATgtgagtccgtctctctctctctctgttccgccgccgccgccgctgctcttttccacctctcgctgaattccgccgtcacacccggttttgcctacccatg...
species | Zea mays |
transcript | GRMZM2G110735_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GTACACGCAGGCGCTGCACAAGGCGCTCATGTTCTTCAACGCGCAGCGAT CCGGTCCGCTGCCGAAGCACAACGGCGTCAGCTGGAGGGGCAATTCCTGCAEST: gi|31358262|gb|CD442619.1|CD442619
genomic: GTACACGCAGGCGCTGCACAAGGCGCTCATGTTCTTCAACGCGCAGCGATgtgagtccgt ... ggaacgtcagCCGGTCCGCTGCCGAAGCACAACGGCGTCAGCTGGAGGGGCAATTCCTGCA
EST: GTACACGCAGGCGCTGCACAAGGCGCTCATGTTCTTCAACGCGCAGCGAT CCGGTCCGCTGCCGAAGCACAACGGCGTCAGCTGGAGGGGCAATTCCTGCAEST: gi|149078624|gb|EE167410.2|EE167410
genomic: GTACACGCAGGCGCTGCACAAGGCGCTCATGTTCTTCAACGCGCAGCGATgtgagtccgt ... ggaacgtcagCCGGTCCGCTGCCGAAGCACAACGGCGTCAGCTGGAGGGGCAATTCCTGCA
EST: GTACACGCAGGCGCTGCACAAGGCGCTCATGTTCTTCAACGCGCAGCGAT CCGGTCCGCTGCCGAAGCACAACGGCGTCAGCTGGAGGGGGCAATTCCT
genomic: GTACACGCAGGCGCTGCACAAGGCGCTCATGTTCTTCAACGCGCAGCGATgtgagtccgt ... ggaacgtcagCCGGTCCGCTGCCGAAGCACAACGGCGTCAGCTGGAGGGG-CAATTCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCGTCAAGCTCGTCCCGCACAAGCGCCCGCCGCCGCCGCCGCCCGACCAGTACACGCAGGCGCTGCACAAGGCGCTCATGTTCTTCAACGCGCAGCGATgtgagtccgtctctctctctctctgttccgccgccgccgccgctgctcttttccacctctcgctgaattccgccgtcacacccggttttgcctacccatg
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