1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AGGTCTCCGCCGACGCTGTCACACGCCAGGAGCTCGAGTCTTCGTCGGTCCCTTTGCCAGATCTTCATCGTGCCCTTCACCAGCGACGAGCACCCAACAGgtatgcccaccctctgtctccattgagggaccttcacgggcggaaccaggataaaatgtgattgagggtatacttccaacaactaacgagataattgcca...
species | Zea mays |
transcript | GRMZM2G107985_T02 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCTTTGCCAGATCTTCATCGTGCCCTTCACCAGCGACGAGCACCCAACAG GTAATCATACACATGATTTGTTTGCCACTACTTTTTAGATGCACAAGATCCEST: gi|149070437|gb|EE158838.2|EE158838
genomic: CCTTTGCCAGATCTTCATCGTGCCCTTCACCAGCGACGAGCACCCAACAGgtatgcccac ... ctgtccccagGTAATCATACACATGATTTGTTTGCCACTACTTTTTAGATGCACAAGATCC
EST: CCTTTGCCAGATCTTCATCGTGCCCTTCACCAGCGACGAGCACCCAACAG GTAATCATACACATGATTTGTTTGCCACTACTTTTTAGATGCACAAGATCC
genomic: CCTTTGCCAGATCTTCATCGTGCCCTTCACCAGCGACGAGCACCCAACAGgtatgcccac ... ctgtccccagGTAATCATACACATGATTTGTTTGCCACTACTTTTTAGATGCACAAGATCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGTCTCCGCCGACGCTGTCACACGCCAGGAGCTCGAGTCTTCGTCGGTCCCTTTGCCAGATCTTCATCGTGCCCTTCACCAGCGACGAGCACCCAACAGgtatgcccaccctctgtctccattgagggaccttcacgggcggaaccaggataaaatgtgattgagggtatacttccaacaactaacgagataattgcca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cccaccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggataaaa