1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' |
GTCTCCTACCGCCGCCGCGGCTGCGCTGGAGAGCAGCAACAACAACCTGTTCCAGGTGATGCGCGCCGTGGAGGACGCGGAGGCCACCATCCGCCAGCAGgtatcagtaccaatctcttcctgcctctgcctctgccaatttgagggaatcggctgcaactagaacaagcgacccatcactcctgtatctctcttcag
species | Zea mays |
transcript | GRMZM2G104377_T03 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCCAGGTGATGCGCGCCGTGGAGGACGCGGAGGCCACCATCCGCCAGCAG CTGGAGGAGAACAGCCGGTTGAAGGACGAGCTGATGCTCAAGACGCGGGAGEST: gi|211528053|gb|FK968562.1|FK968562
genomic: TCCAGGTGATGCGCGCCGTGGAGGACGCGGAGGCCACCATCCGCCAGCAGgtatcagtac ... ctctcttcagCTGGAGGAGAACAGCCGGTTGAAGGACGAGCTGATGCTCAAGACGCGGGAG
EST: TCCAGGTGATGCGCGCCGTGGAGGACGCGGAGGCCACCATCCGCCAGCAG CTGGAGGAGAACAGCCGGTTGAAGGACGAGCTGATGCTCAAGACGCGGGAGEST: gi|211528050|gb|FK968559.1|FK968559
genomic: TCCAGGTGATGCGCGCCGTGGAGGACGCGGAGGCCACCATCCGCCAGCAGgtatcagtac ... ctctcttcagCTGGAGGAGAACAGCCGGTTGAAGGACGAGCTGATGCTCAAGACGCGGGAG
EST: TCCAGGTGATGCGCGCCGTGGAGGACGCGGAGGCCACCATCCGCCAGCAG CTGGAGGAGAACAGCCGGTTGAAGGACGAGCTGATGCTCAAGACGCGGGAGEST: gi|211528051|gb|FK968560.1|FK968560
genomic: TCCAGGTGATGCGCGCCGTGGAGGACGCGGAGGCCACCATCCGCCAGCAGgtatcagtac ... ctctcttcagCTGGAGGAGAACAGCCGGTTGAAGGACGAGCTGATGCTCAAGACGCGGGAG
EST: TCCAGGTGATGCGCGCCGTKGAGGACGCGGAGGCCACCATCCGCCAGCAG CTGGAGGAGAACAGCCGGTTKAAGGACGAGCTGATGCTCAAGACGCGGGAGEST: gi|211528054|gb|FK968563.1|FK968563
genomic: TCCAGGTGATGCGCGCCGTGGAGGACGCGGAGGCCACCATCCGCCAGCAGgtatcagtac ... ctctcttcagCTGGAGGAGAACAGCCGGTTGAAGGACGAGCTGATGCTCAAGACGCGGGAG
EST: TCCAGGTGATGCGCGCCGTGGAGGACGCGGAGGCCACCATCCGCCAGCAG CTGGAGGAGAACAGCCGGTTGAAGGACGAGCTGATGCTCAAGACGCGGGAG
genomic: TCCAGGTGATGCGCGCCGTGGAGGACGCGGAGGCCACCATCCGCCAGCAGgtatcagtac ... ctctcttcagCTGGAGGAGAACAGCCGGTTGAAGGACGAGCTGATGCTCAAGACGCGGGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCTCCTACCGCCGCCGCGGCTGCGCTGGAGAGCAGCAACAACAACCTGTTCCAGGTGATGCGCGCCGTGGAGGACGCGGAGGCCACCATCCGCCAGCAGgtatcagtaccaatctcttcctgcctctgcctctgccaatttgagggaatcggctgcaactagaacaagcgacccatcactcctgtatctctcttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA