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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCCACTTTCGTCGCTGTTTTTCTCCTAGTCCTCGTGCTTCTCACCATGGACGCGGCGCAGGGTCAACAGCCGTTCCCGCTGTCCACCGATCCATCCGACGgtatcgatctctcgctccttctgtggcatctgaagttgtgtaatggcgacgaaatagttggcagctagtaaatcgtggatctcgtgttcctgcag

Basic information

species Zea mays
transcript GRMZM2G103033_T02
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|37425182|gb|CF650328.1|CF650328
EST:     CGCGGCGCAGGGTCAACAGCCGTTCCCGCTGTCCACCGATCCATCCGACG                         CGGATGCTCTGCACGCTGTGTTCCGGCAGTGGAGACTGGAGGGCGGCGCGG
genomic: CGCGGCGCAGGGTCAACAGCCGTTCCCGCTGTCCACCGATCCATCCGACGgtatcgatct ... gttcctgcagCGGATGCTCTGCACGCTGTGTTCCGGCAGTGGAGACTGGAGGGCGGCGCGG
EST: gi|211265619|gb|FL356060.1|FL356060
EST:     CGCGGCGCAGGGTCAACAGCCGTTCCCGCTGTCCACCGATCCATCCGACG                         CGGATGCTCTGCACGCTGTGTTCCGGCAGTGGAGACTGGAGGGCGGCGCGG
genomic: CGCGGCGCAGGGTCAACAGCCGTTCCCGCTGTCCACCGATCCATCCGACGgtatcgatct ... gttcctgcagCGGATGCTCTGCACGCTGTGTTCCGGCAGTGGAGACTGGAGGGCGGCGCGG
EST: gi|211178693|gb|FL329875.1|FL329875
EST:     CGCGGCGCAGGGTCAACAGCCGTTCCCGCTGTCCACCGATCCATCCGACG                         CGGATGCTCTGCACGCTGTGTTCCGGCAGTGGAGACTGGAGGGCGGCGCGG
genomic: CGCGGCGCAGGGTCAACAGCCGTTCCCGCTGTCCACCGATCCATCCGACGgtatcgatct ... gttcctgcagCGGATGCTCTGCACGCTGTGTTCCGGCAGTGGAGACTGGAGGGCGGCGCGG
EST: gi|211413975|gb|FL312351.1|FL312351
EST:     CGCGGCGCAGGGTCAACAGCCGTTCCCGCTGTCCACCGATCCATCCGACG                         CGGATGCTCTGCACGCTGTGTTCCGGCAGTGGAGACTGGAGGGCGGCGCGG
genomic: CGCGGCGCAGGGTCAACAGCCGTTCCCGCTGTCCACCGATCCATCCGACGgtatcgatct ... gttcctgcagCGGATGCTCTGCACGCTGTGTTCCGGCAGTGGAGACTGGAGGGCGGCGCGG