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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTTGGGGGATTTTGTTTAGGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttactctctagcgctctggtttgtgtccagatcttgcggaattgtgttgcgatgcgcccgtcgtccgtgtgtgcttgagttgtaggttggtgtct...

Basic information

species Zea mays
transcript GRMZM2G102471_T03
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G102471_T03 (Zea mays), 5'ss of exon 1
lower sequence: LOC_Os04g57220.3 (Oryza sativa), 5'ss of exon 1
--TTTTGGGGGATTTTGTTTAGGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttactctctagcgctctggtttgtgtccagatcttgcggaattgtgttgcgatgcgcccgtcg-tccgtgtgtgcttgagttgtaggttggtgtct
  ||||| |||  |  | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||| |||  ||| ||  | ||||||||||| | |||   ||||||||  |  || | |  ||||| | ||  ||||    || |   ||
TGTTTTGTGGGGGT--GATTAGGGTTTGATCGATGGCGTCCAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACCTCATGCAGCGCAGgtgatttgatctctatcgccttggatttcgcccagatcttgccggattcgattgcgatgaacgtgttggtttgtgtg-gtttctgttgcgttttagatgct

upper sequence: GRMZM2G102471_T03 (Zea mays), 5'ss of exon 1
lower sequence: LOC_Os04g57220.1 (Oryza sativa), 5'ss of exon 2
TTTTGGGGGATTTTGTTTAGGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttactctctagcgctctggtttgtgtccagatcttgcggaattgtgttgcgatgcgcccgtcg-tccgtgtgtgcttgagttgtaggttggtgtct
                    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||| |||  ||| ||  | ||||||||||| | |||   ||||||||  |  || | |  ||||| | ||  ||||    || |   ||
--------------------GGTTTGATCGATGGCGTCCAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACCTCATGCAGCGCAGgtgatttgatctctatcgccttggatttcgcccagatcttgccggattcgattgcgatgaacgtgttggtttgtgtg-gtttctgttgcgttttagatgct

upper sequence: GRMZM2G102471_T03 (Zea mays), 5'ss of exon 1
lower sequence: Vv19s0015g01190.t01 (Vitis vinifera), 5'ss of exon 2
----TTTTGGGGGATTTTGTTTAGGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtga---tttactctctagcgctctggtttgtgtccagatcttgcggaattgtgttgcga-tgcgcccgtcgtccgtgtgtgcttgagttgtaggttggtgtct
    | |   |  | |||| | |   | ||    ||||| || ||| | ||    ||||||||||||||||||||||||||||| ||||| || ||||| || |||     | ||   |||     |||  ||| |   ||  ||     |  |  | || |   | |  | |      |  | | || || |   |   ||      
CAACTGTATTGAAACTTTGGTCA--ATCTG--TAATGGCTTCAAAGCGAATTAACAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttctatcttctccttttctcctttttaatcaattcaatttgtttcttatttcatctccttctggaactggcatttcctagaatctcaatctgcc----

upper sequence: GRMZM2G102471_T03 (Zea mays), 5'ss of exon 1
lower sequence: EDO98738 (Chlamydomonas reinhardtii), 5'ss of exon 2
TTTTGGGGGATTTTGTTTAGGGTTTGATCGATGGCGT-CGAAGAGGATCCTGAAGGAGTTGAAGG-----ACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttactctctagcgctctggtttgtgtccagatcttgcggaattgtgttgcgatgcgcccgtcgtccgtgtgtgcttgagttgtaggttggtgtct------
             ||   | ||      | |   ||| |   | ||  ||||  || | |||        ||  ||||  |   |    |   || |   ||   |||||    ||||     |  | |  | | ||  ||  |  ||  | | |     |||   |  ||  | | |      ||   |   ||  ||  ||||       
---------GACCTGCAGAAGGACCCGCCCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgcagcggttcgtctggcctgggtgacgcgctct-----gggcagagtcgcgtataggcccagcccagtcgcagaacgacctgtgcggtgactg---aaactgacgccctaacttcctgtccttatag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213168075|gb|FM189689.1|FM189689
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|29544262|gb|CB604642.1|CB604642
EST:     GCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|60358106|gb|DN225079.1|DN225079
EST:     CCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: CCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|15005358|gb|BI325425.1|BI325425
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|14996926|gb|BI319069.1|BI319069
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|30032047|gb|CB833898.1|CB833898
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|28188244|gb|CB179854.1|CB179854
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGNCCCGCCCACCTCCTGCAGCGNNG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|8930451|gb|BE225215.1|BE225215
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|24768514|gb|CA403643.1|CA403643
EST:     AGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: AGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|32801264|gb|CD953500.1|CD953500
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|44681889|gb|CK786937.1|CK786937
EST:     GAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|15005299|gb|BI325366.1|BI325366
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|14701079|gb|BI233497.1|BI233497
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|31353415|gb|CD437772.1|CD437772
EST:     CACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: CACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|30306506|gb|CD001179.1|CD001179
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|31611776|gb|CD568398.1|CD568398
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211534736|gb|FL446823.1|FL446823
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|60398708|gb|DN231524.1|DN231524
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|60338435|gb|DN205408.1|DN205408
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|33103550|gb|CF063510.1|CF063510
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|28361762|gb|CB240118.1|CB240118
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|60338156|gb|DN205129.1|DN205129
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|76922366|gb|DV168970.1|DV168970
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|4776009|gb|AI665012.1|AI665012
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|16925215|gb|BM078283.1|BM078283
EST:     AGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: AGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|33100938|gb|CF060898.1|CF060898
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATCGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|60395487|gb|DN228357.1|DN228357
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|30087063|gb|CB885271.1|CB885271
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|60672484|gb|DN475190.1|DN475190
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCACCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|32802365|gb|CD954601.1|CD954601
EST:     GAGGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|60338847|gb|DN205820.1|DN205820
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211244915|gb|FL033402.1|FL033402
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|74236333|gb|DT644247.1|DT644247
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|9255375|gb|BE345843.1|BE345843
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|50322867|gb|CO517993.1|CO517993
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|15632511|gb|BI679604.1|BI679604
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|32801414|gb|CD953650.1|CD953650
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|32803451|gb|CD955687.1|CD955687
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211046385|gb|FL323582.1|FL323582
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|29129906|gb|CB380610.1|CB380610
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|60339483|gb|DN206456.1|DN206456
EST:     GACCCGCCCACCTCNTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|32803890|gb|CD956126.1|CD956126
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|78078804|gb|DV507216.1|DV507216
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|31910045|gb|CD651225.1|CD651225
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|31664371|gb|CD573096.1|CD573096
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|32801349|gb|CD953585.1|CD953585
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|24768001|gb|CA403134.1|CA403134
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|32798360|gb|CD950596.1|CD950596
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|32823799|gb|CD963521.1|CD963521
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|120481251|gb|EH211237.1|EH211237
EST:     CTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: CTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|71438668|gb|DR819718.1|DR819718
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211205521|gb|FL437992.1|FL437992
EST:     TCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: TCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|86467694|gb|DY234064.1|DY234064
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|60337704|gb|DN204677.1|DN204677
EST:     TGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: TGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|67015277|gb|CO444026.1|CO444026
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|93282003|gb|EB674267.1|EB674267
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|31350155|gb|CD434512.1|CD434512
EST:     GAAGGAGTTGAAGGACCTGCCTAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCACGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|28873453|gb|CB329440.1|CB329440
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|31356946|gb|CD441303.1|CD441303
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|30306624|gb|CD001297.1|CD001297
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|28930861|gb|CB334222.1|CB334222
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|9566430|gb|BE475939.1|BE475939
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGGCCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|9255245|gb|BE345713.1|BE345713
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|14202235|gb|BG835912.1|BG835912
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGG-CTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|29544277|gb|CB604657.1|CB604657
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|93016113|gb|EB641633.1|EB641633
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|37399559|gb|CF637109.1|CF637109
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCAT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|22473127|gb|BU037607.1|BU037607
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCCCCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|32802630|gb|CD954866.1|CD954866
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|31405724|gb|CD484456.1|CD484456
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|16922704|gb|BM075696.1|BM075696
EST:     GGAGTTAAAGGACCTGCAGAAGGACCCGCCCACATCATGCAGCGCAG                         GTCCTGTTGGTGAGAACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|30306851|gb|CD001524.1|CD001524
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|78080748|gb|DV509160.1|DV509160
EST:     CTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: CTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|78544394|gb|DV621892.1|DV621892
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|22473128|gb|BU037608.1|BU037608
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|60396734|gb|DN229599.1|DN229599
EST:     GGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|74236334|gb|DT644248.1|DT644248
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|31664372|gb|CD573097.1|CD573097
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|28986776|gb|CB351304.1|CB351304
EST:     GAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|18174869|gb|BM350257.1|BM350257
EST:     GGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCATT
genomic: GGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|60347597|gb|DN214570.1|DN214570
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|78078803|gb|DV507215.1|DV507215
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|74244079|gb|DT651993.1|DT651993
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|4886015|gb|AI677135.1|AI677135
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|71768912|gb|DR966849.1|DR966849
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|22819165|gb|BU499255.1|BU499255
EST:     AAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: AAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|71312022|gb|DR792534.1|DR792534
EST:     CAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: CAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|31557955|gb|CD527167.1|CD527167
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|71759559|gb|DR957496.1|DR957496
EST:     GTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|31356094|gb|CD440451.1|CD440451
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|6851553|gb|AW352563.1|AW352563
EST:     CTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: CTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|30087004|gb|CB885212.1|CB885212
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|14996854|gb|BI319031.1|BI319031
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|60339137|gb|DN206110.1|DN206110
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|15312972|gb|BI478490.1|BI478490
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|20208304|gb|BQ134393.1|BQ134393
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|20300056|gb|BQ162999.1|BQ162999
EST:     TGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: TGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TTTTGGGGGATTTTGTTTAGGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttactctctagcgctctggtttgtgtccagatcttgcggaattgtgttgcgatgcgcccgtcgtccgtgtgtgcttgagttgtaggttggtgtct

- - - - - - - - - - - - - - - - - - - - - - - - -  AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - -  TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTGCAG