1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TCAAGAAGGCGTACGAGCTGTCGCTGCTGTGCGACGCCGAGGTCGCGCTCATCATATTCTCCGGCCGCGGCCGCCTCTTCGAGTTCTCCAGCTCCTCATGgtacgtacgtacgacgcacgcgcgctcccgcttgcccctgtatgcatatctgatctatgtatattccgcaacccccaaaatgaacaaaatttattgatat...
species | Zea mays |
transcript | GRMZM2G102161_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCTCTTCGAGTTCTCCAGCTCCTCATG CATGTACAAAACACTCGAGAGATACCGCAGCTCCAACTACAGCACACAGGAEST: gi|211336947|gb|FL070178.1|FL070178
genomic: CCTCTTCGAGTTCTCCAGCTCCTCATGgtacgtacgt ... gtgccaacagCATGTACAAAACACTCGAGAGATACCGCAGCTCCAACTACAGCACACAGGA
EST: ATCATATTCTCCGGCCGCGGCCGCCTCTTCGAGTTCTCCAGCTCCTCATG CATGTACAAAACACTCGAGAGATACCGCAGCTCCAACTACAGCACACAGGAEST: gi|32845819|gb|CD985500.1|CD985500
genomic: ATCATATTCTCCGGCCGCGGCCGCCTCTTCGAGTTCTCCAGCTCCTCATGgtacgtacgt ... gtgccaacagCATGTACAAAACACTCGAGAGATACCGCAGCTCCAACTACAGCACACAGGA
EST: ATCATATTCTCCGGCCGCGGCCGCCTCTTCGAGTTCTCCAGCTCCTCATG CATGTACAAAACACTCGAGAGATACCGCAGCTCCAACTACAGCACACAGGAEST: gi|211334796|gb|FL070174.1|FL070174
genomic: ATCATATTCTCCGGCCGCGGCCGCCTCTTCGAGTTCTCCAGCTCCTCATGgtacgtacgt ... gtgccaacagCATGTACAAAACACTCGAGAGATACCGCAGCTCCAACTACAGCACACAGGA
EST: ATCATATTCTCCGGCCGCGGC-GCCTCTTCGAGTTCTCCAGCTCCTCATG CATGTACAAAACACTCGAGAGATACCGCAGCTCCAACTACAGCACACAGGAEST: gi|211336948|gb|FL070179.1|FL070179
genomic: ATCATATTCTCCGGCCGCGGCCGCCTCTTCGAGTTCTCCAGCTCCTCATGgtacgtacgt ... gtgccaacagCATGTACAAAACACTCGAGAGATACCGCAGCTCCAACTACAGCACACAGGA
EST: ATCATATTCTCCGGCCGCGGC-GCMTCTTCGAGTTCTCCAGCTCCTCATG CATGTACAAAACACTTCGAGAGATACCGCAGCTCCAACTACAGCACACAGGEST: gi|211336950|gb|FL070181.1|FL070181
genomic: ATCATATTCTCCGGCCGCGGCCGCCTCTTCGAGTTCTCCAGCTCCTCATGgtacgtacgt ... gtgccaacagCATGTACAAAACACT-CGAGAGATACCGCAGCTCCAACTACAGCACACAGG
EST: ATCATATTCTCCGGCCGCGG-CSCCTCTTCGAGTTCTCCAGCTCCTCATG CATGTACAAAACACTCGAGAGATACCGCAGCTCCAACTACAGCACACAGGA
genomic: ATCATATTCTCCGGCCGCGGCCGCCTCTTCGAGTTCTCCAGCTCCTCATGgtacgtacgt ... gtgccaacagCATGTACAAAACACTCGAGAGATACCGCAGCTCCAACTACAGCACACAGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAAGAAGGCGTACGAGCTGTCGCTGCTGTGCGACGCCGAGGTCGCGCTCATCATATTCTCCGGCCGCGGCCGCCTCTTCGAGTTCTCCAGCTCCTCATGgtacgtacgtacgacgcacgcgcgctcccgcttgcccctgtatgcatatctgatctatgtatattccgcaacccccaaaatgaacaaaatttattgatat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctcccgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaacaaaa