1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CCGCGTTCGTGGGCCAGGTGTTCACCATGCTCGACCCATCCGGGAACGGGCTCATGGCCGTTACCACACGCTTCGAGCTCCCGCGCTTCCTCACCAACAGgtaatagctgccccgatcggtgccctgcactctgccgtgttgatttccacactgggccgctgccgctgctctatggataggattgcaacacagctgagct...
species | Zea mays |
transcript | GRMZM2G097959_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCATGGCCGTTACCACACGCTTCGAGCTCCCGCGCTTCCTCACCAACAG GACTCCTATGTGGTTCAAAAGGATGCTATCACCGTCGAAGAAGACTGAAAAEST: gi|31355876|gb|CD440233.1|CD440233
genomic: TCATGGCCGTTACCACACGCTTCGAGCTCCCGCGCTTCCTCACCAACAGgtaatagctg ... cttgtttcagGACTCCTATGTGGTTCAAAAGGATGCTATCACCGTCGAAGAAGACTGAAAA
EST: CTCATGGCCGTTACCACACGCTTCGAGCTCCCGCGCTTCCTCACCAACAG GACTCCTATGTGGTTCAAAAGGATGCTATCACCGTCGAAGAAGACTGAAAAEST: gi|211247171|gb|FL378131.1|FL378131
genomic: CTCATGGCCGTTACCACACGCTTCGAGCTCCCGCGCTTCCTCACCAACAGgtaatagctg ... cttgtttcagGACTCCTATGTGGTTCAAAAGGATGCTATCACCGTCGAAGAAGACTGAAAA
EST: TCATGGCCGTTACCACACGCTTCGAGCTCCCGCGCTTCCTCACCAACAG GACTCCTATGTGGTTCAAAAGGATGCTATCACCGTCGAAGAAGACTGAAAA
genomic: TCATGGCCGTTACCACACGCTTCGAGCTCCCGCGCTTCCTCACCAACAGgtaatagctg ... cttgtttcagGACTCCTATGTGGTTCAAAAGGATGCTATCACCGTCGAAGAAGACTGAAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCGCGTTCGTGGGCCAGGTGTTCACCATGCTCGACCCATCCGGGAACGGGCTCATGGCCGTTACCACACGCTTCGAGCTCCCGCGCTTCCTCACCAACAGgtaatagctgccccgatcggtgccctgcactctgccgtgttgatttccacactgggccgctgccgctgctctatggataggattgcaacacagctgagct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctgcccc