Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|211266228|gb|FL159045.1|FL159045EST: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST:
gi|87153316|gb|DY398105.1|DY398105EST: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA GTGACCGTTGCCTACAACAAGGATCCCAGCCCCATGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST:
gi|22491232|gb|BU051155.1|BU051155EST: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA GTGACCGTTGCCTACAACAAGGATCCCAGCCCCATGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST:
gi|16137337|gb|BI894202.1|BI894202EST: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA GTGACCGTTGCCTACAACAAGGATCCCAGCCCCATGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTCCGCCACCTCCACCCTCGAATCGTTCCCCACCATGGCGTCGCAGGGATCCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgtctccccagtcctttttagcttcctttcccacggtgatctggttgtcgctatcggtcgcgcggtttcgatgcgatcgcggcctcgtgggtttgctctggctgatcagtgttcgtttggtttctgggcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA