1 5' 3' | 2 5' 3' | 3 5' 3' |
GAAGCAATTTAGGGAGACTGAGGAGATGAAGGCCAAGGCACAGATAACTTATGCCCAACCAGACGATCTTATTGATTTCTATCACCTAAAGAGCAGGAAGgtgagactgatatacttgtctcttattctttttgctctgaaacaatatttgttctctattgggtactgattgctagttcacatttttctcattccattag...
species | Zea mays |
transcript | GRMZM2G094699_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATGCCCAACCAGACGATCTTATTGATTTCTATCACCTAAAGAGCAGGAAG GGAATGAGTCAGCTTGAGCTGGAAGATGCAGTTCAAGATGATTTGAAGGCTEST: gi|67015126|gb|CO443875.1|CO443875
genomic: ATGCCCAACCAGACGATCTTATTGATTTCTATCACCTAAAGAGCAGGAAGgtgagactga ... tttgtcacagGGAATGAGTCAGCTTGAGCTGGAAGATGCAGTTCAAGATGATTTGAAGGCT
EST: ATGCCCAACCAGACGATCTTATTGATTTCTATCACCTAAAGAGCAGGAAG GGAATGAGTCAGCTTGAGCTGGAAGATGCAGTTCAAGATGATTTGAAGGCT
genomic: ATGCCCAACCAGACGATCTTATTGATTTCTATCACCTAAAGAGCAGGAAGgtgagactga ... tttgtcacagGGAATGAGTCAGCTTGAGCTGGAAGATGCAGTTCAAGATGATTTGAAGGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGCAATTTAGGGAGACTGAGGAGATGAAGGCCAAGGCACAGATAACTTATGCCCAACCAGACGATCTTATTGATTTCTATCACCTAAAGAGCAGGAAGgtgagactgatatacttgtctcttattctttttgctctgaaacaatatttgttctctattgggtactgattgctagttcacatttttctcattccattag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG