1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GTTGGTAGTGAAACTGGAAATCCTTCTTATCAAGTGAAAATTGTAGACTGTGGTGAAGTTTCCAACACAAATTCTCAGGATCCGCTAAAGGGAGATAAAGgtataaatagatgaatacaatgtacagctgcaaatatttttatgttctttctgcttatctttctaattgccactttttgcag
species | Zea mays |
transcript | GRMZM2G094083_T02 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TGGTGAAGTTTCCAACACAAATTCTCAGGATCCGCTAAAGGGAGATAAAG TAAGCTCAAAGACAGATAACAGCAGTTCAGACAGTGAAAAGGGTGGCCATCEST: gi|60398594|gb|DN231410.1|DN231410
genomic: TGGTGAAGTTTCCAACACAAATTCTCAGGATCCGCTAAAGGGAGATAAAGgtataaatag ... ctttttgcagTAAGCTCAAAGACAGATAACAGCAGTTCAGACAGTGAAAAGGGTGGCCATC
EST: TGGTGAAGTTTCCAACACAAATTCTCAGGATCCGCTAAAGGGAGATAAAG TAAGCTCAAAGACAGATAACAGCAGTTCAGACAGTGAAAAGGGTGGCCATCEST: gi|149077555|gb|EE166252.2|EE166252
genomic: TGGTGAAGTTTCCAACACAAATTCTCAGGATCCGCTAAAGGGAGATAAAGgtataaatag ... ctttttgcagTAAGCTCAAAGACAGATAACAGCAGTTCAGACAGTGAAAAGGGTGGCCATC
EST: TGGTGAAGTTTCCAACACAAATTCTCAGGATCCGCTAAAGGGAGATAAAG TAAGCTCAAAGACAGATAACAGCAGTTCAGACAGTGAAAAGGGTGGCCATCEST: gi|76013072|gb|DT940242.1|DT940242
genomic: TGGTGAAGTTTCCAACACAAATTCTCAGGATCCGCTAAAGGGAGATAAAGgtataaatag ... ctttttgcagTAAGCTCAAAGACAGATAACAGCAGTTCAGACAGTGAAAAGGGTGGCCATC
EST: TGGTGAAGTTTCCAACACAAATTCTCAGGATCCGCTAAAGGGAGATAAAG TAAGCTCAAAGACAGATAACAGCAGTTCAGACAGTGAAAAGGGTGGCCATCEST: gi|88755914|gb|DY540055.1|DY540055
genomic: TGGTGAAGTTTCCAACACAAATTCTCAGGATCCGCTAAAGGGAGATAAAGgtataaatag ... ctttttgcagTAAGCTCAAAGACAGATAACAGCAGTTCAGACAGTGAAAAGGGTGGCCATC
EST: TGGTGAAGTTTCCAACACAAATTCTCAGGATCCGCTAAAGGGAGATAAAG TAAGCTCAAAGACAGATAACAGCAGTTCAGACAGTGAAAAGGGTGGCCATCEST: gi|88755951|gb|DY540092.1|DY540092
genomic: TGGTGAAGTTTCCAACACAAATTCTCAGGATCCGCTAAAGGGAGATAAAGgtataaatag ... ctttttgcagTAAGCTCAAAGACAGATAACAGCAGTTCAGACAGTGAAAAGGGTGGCCATC
EST: TGGTGAAGTTTCCAACACAAATTCTCAGGATCCGCTAAAGGGAGATAAAG TAAGCTCAAAGACAGATAACAGCAGTTCAGACAGTGAAAAGGGTGGCCATCEST: gi|148945759|gb|EC891040.2|EC891040
genomic: TGGTGAAGTTTCCAACACAAATTCTCAGGATCCGCTAAAGGGAGATAAAGgtataaatag ... ctttttgcagTAAGCTCAAAGACAGATAACAGCAGTTCAGACAGTGAAAAGGGTGGCCATC
EST: TGGTGAAGTTTCCAACACAAATTCTCAGGATCCGCTAAAGGGAGATAAAG TAAGCTCAAAGACAGATAACAGCAGTTCAGACAGTGAAAAGGGTGGCCATC
genomic: TGGTGAAGTTTCCAACACAAATTCTCAGGATCCGCTAAAGGGAGATAAAGgtataaatag ... ctttttgcagTAAGCTCAAAGACAGATAACAGCAGTTCAGACAGTGAAAAGGGTGGCCATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGGTAGTGAAACTGGAAATCCTTCTTATCAAGTGAAAATTGTAGACTGTGGTGAAGTTTCCAACACAAATTCTCAGGATCCGCTAAAGGGAGATAAAGgtataaatagatgaatacaatgtacagctgcaaatatttttatgttctttctgcttatctttctaattgccactttttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT