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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCTCGATCGACACACGCAGCCGCGACCTGACCCGACCCTCCCGAGGCCGCCAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCgcgaggtgagtccgcagcccgtgctcccgcgctccttcctcgcctccccctctaattagaggctcctccgcgctctcggcaggggtttagctgccgtggt...

Basic information

species Zea mays
transcript GRMZM2G083716_T04
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|148983129|gb|EE029060.2|EE029060
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148983129|gb|EE029060.2|EE029060
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148983129|gb|EE029060.2|EE029060
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148983129|gb|EE029060.2|EE029060
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148983129|gb|EE029060.2|EE029060
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148983129|gb|EE029060.2|EE029060
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148983129|gb|EE029060.2|EE029060
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148983089|gb|EE029008.2|EE029008
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148983089|gb|EE029008.2|EE029008
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148983089|gb|EE029008.2|EE029008
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148983089|gb|EE029008.2|EE029008
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148983089|gb|EE029008.2|EE029008
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148983089|gb|EE029008.2|EE029008
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148983089|gb|EE029008.2|EE029008
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149009207|gb|EE041320.2|EE041320
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149009207|gb|EE041320.2|EE041320
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149009207|gb|EE041320.2|EE041320
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149009207|gb|EE041320.2|EE041320
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149009207|gb|EE041320.2|EE041320
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149009207|gb|EE041320.2|EE041320
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149009207|gb|EE041320.2|EE041320
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148963973|gb|EE015101.2|EE015101
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148963973|gb|EE015101.2|EE015101
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148963973|gb|EE015101.2|EE015101
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148963973|gb|EE015101.2|EE015101
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148963973|gb|EE015101.2|EE015101
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148963973|gb|EE015101.2|EE015101
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148963973|gb|EE015101.2|EE015101
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149080249|gb|EE169273.2|EE169273
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149080249|gb|EE169273.2|EE169273
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149080249|gb|EE169273.2|EE169273
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149080249|gb|EE169273.2|EE169273
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149080249|gb|EE169273.2|EE169273
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149080249|gb|EE169273.2|EE169273
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149080249|gb|EE169273.2|EE169273
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149099158|gb|EE185183.2|EE185183
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149099158|gb|EE185183.2|EE185183
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149099158|gb|EE185183.2|EE185183
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149099158|gb|EE185183.2|EE185183
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149099158|gb|EE185183.2|EE185183
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149099158|gb|EE185183.2|EE185183
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149099158|gb|EE185183.2|EE185183
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148941096|gb|EC885959.2|EC885959
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148941096|gb|EC885959.2|EC885959
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148941096|gb|EC885959.2|EC885959
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148941096|gb|EC885959.2|EC885959
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148941096|gb|EC885959.2|EC885959
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148941096|gb|EC885959.2|EC885959
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148941096|gb|EC885959.2|EC885959
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|211393798|gb|FL326098.1|FL326098
EST:     AG                         AAGACATGGCCTCGACGTTCGGTGCCACTTCTACAGTTGGCCTTATGGCT
genomic: --gcgaggtgag ... catgcagtagAAGACATGGCCTCGACGTTCGGTGCCACTTCTACAGTTGGCCTTATGGCT
EST: gi|211393798|gb|FL326098.1|FL326098
EST:     AG                         AAGACATGGCCTCGACGTTCGGTGCCACTTCTACAGTTGGCCTTATGGCT
genomic: --gcgaggtgag ... catgcagtagAAGACATGGCCTCGACGTTCGGTGCCACTTCTACAGTTGGCCTTATGGCT
EST: gi|211393798|gb|FL326098.1|FL326098
EST:     AG                         AAGACATGGCCTCGACGTTCGGTGCCACTTCTACAGTTGGCCTTATGGCT
genomic: --gcgaggtgag ... catgcagtagAAGACATGGCCTCGACGTTCGGTGCCACTTCTACAGTTGGCCTTATGGCT
EST: gi|211393798|gb|FL326098.1|FL326098
EST:     AG                         AAGACATGGCCTCGACGTTCGGTGCCACTTCTACAGTTGGCCTTATGGCT
genomic: --gcgaggtgag ... catgcagtagAAGACATGGCCTCGACGTTCGGTGCCACTTCTACAGTTGGCCTTATGGCT
EST: gi|148940496|gb|EC885295.2|EC885295
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148940496|gb|EC885295.2|EC885295
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148940496|gb|EC885295.2|EC885295
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148940496|gb|EC885295.2|EC885295
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148940496|gb|EC885295.2|EC885295
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148940496|gb|EC885295.2|EC885295
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148940496|gb|EC885295.2|EC885295
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|78080918|gb|DV509330.1|DV509330
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|78080918|gb|DV509330.1|DV509330
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|78080918|gb|DV509330.1|DV509330
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|78080918|gb|DV509330.1|DV509330
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|78080918|gb|DV509330.1|DV509330
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|78080918|gb|DV509330.1|DV509330
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|78080918|gb|DV509330.1|DV509330
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148961770|gb|EE012547.2|EE012547
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148961770|gb|EE012547.2|EE012547
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148961770|gb|EE012547.2|EE012547
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|148961770|gb|EE012547.2|EE012547
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149075815|gb|EE164351.2|EE164351
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149075815|gb|EE164351.2|EE164351
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149075815|gb|EE164351.2|EE164351
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149075815|gb|EE164351.2|EE164351
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149075815|gb|EE164351.2|EE164351
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149075815|gb|EE164351.2|EE164351
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|149075815|gb|EE164351.2|EE164351
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|71764884|gb|DR962821.1|DR962821
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|71764884|gb|DR962821.1|DR962821
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|71764884|gb|DR962821.1|DR962821
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|71764884|gb|DR962821.1|DR962821
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|71764884|gb|DR962821.1|DR962821
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|71764884|gb|DR962821.1|DR962821
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta
EST: gi|71764884|gb|DR962821.1|DR962821
EST:     CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCGC                        
genomic: CAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAA--GCgcgaggtgag ... catgcagta

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
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TCTCGATCGACACACGCAGCCGCGACCTGACCCGACCCTCCCGAGGCCGCCAGCCTTATCCTCTCCGCCTCCCGCCGTCCCCCGCGACCCATCCGCAAGCgcgaggtgagtccgcagcccgtgctcccgcgctccttcctcgcctccccctctaattagaggctcctccgcgctctcggcaggggtttagctgccgtggt

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