Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|211433883|gb|FL042042.1|FL042042EST: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211092255|gb|FL379380.1|FL379380EST: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211284118|gb|FL041939.1|FL041939EST: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTANGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAG
EST:
gi|211213087|gb|FL091263.1|FL091263EST: AGAAGCCCGCGGA-GG-GGCG-CCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211426082|gb|FL041995.1|FL041995EST: AGAAGCCCGCGGAGGG-SGCG-CCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211433881|gb|FL042040.1|FL042040EST: AGAAGCCCGCGGAGGGCGNCGCCCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCC
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCC
EST:
gi|211439085|gb|FL042077.1|FL042077EST: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGCCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211433885|gb|FL042044.1|FL042044EST: AGAAGCCCGCGGAGGG-SGCG-CCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211284124|gb|FL041945.1|FL041945EST: AGAAGCCCGCGGAGGG-GGCG-CCACATCAACCTTAAGGTCAAAGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211289244|gb|FL450233.1|FL450233EST: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211282314|gb|FL041932.1|FL041932EST: AGAWKCCCGCGGAGGGCGNCGCC-ACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211285926|gb|FL041955.1|FL041955EST: GAWGCCCGCGGAGGGSGGTCGCC-ACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: GAAGCCCGCGGAGGGCGG-CGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211436489|gb|FL042062.1|FL042062EST: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211405134|gb|FL136265.1|FL136265EST: AGAAGCCCGCGGAGGG-GNCG-CCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211426089|gb|FL042002.1|FL042002EST: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211284127|gb|FL041948.1|FL041948EST: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211420882|gb|FL041974.1|FL041974EST: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCANGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAANAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211057702|gb|FL415599.1|FL415599EST: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211210510|gb|FL091239.1|FL091239EST: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211423481|gb|FL041990.1|FL041990EST: AGAAGCCCGCGGAGGGSG-CGCC-ACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGMTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|67018376|gb|CO447125.1|CO447125EST: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211402603|gb|FL136260.1|FL136260EST: AGAAGCCCGCGGA-GG-GGCG-CCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211436487|gb|FL042060.1|FL042060EST: AGAAGCCCGCGGA-GGSSGCG-CCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211428689|gb|FL042021.1|FL042021EST: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211282307|gb|FL041925.1|FL041925EST: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211436483|gb|FL042056.1|FL042056EST: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211439078|gb|FL042070.1|FL042070EST: AGAAGCCCGCGGAGGGC-GCG-CCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
EST:
gi|211405131|gb|FL136262.1|FL136262EST: AGAAGCCCGCGGAGGG-GTCG-CCACATCAACCTTAAGGTCAAGGGACAG GATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
genomic: AGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAG
RNA-Seq data
ATGC Supported by RNA-Seq exonic block that spans over the splice site
atgs Truncated intron sequence
Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.
Found data for 4 RNA-Seq libraries.
Block sizes:
49 (upstream exon),
49 (downstream exon)
Score:
2289ATCGCCGGAAAACTAACCCCTAACGATGTCTGGAGCCGGCGAGGAGGACAAGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAGCTGATGAACGCTTATTGTGACCGCCAGTCTGTGGACATGAATGCCATTG
Block sizes:
49 (upstream exon),
49 (downstream exon)
Score:
943ATCGCCGGAAAACTAACCCCTAACGATGTCTGGAGCCGGCGAGGAGGACAAGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAGCTGATGAACGCTTATTGTGACCGCCAGTCTGTGGACATGAATGCCATTG
Block sizes:
49 (upstream exon),
49 (downstream exon)
Score:
596ATCGCCGGAAAACTAACCCCTAACGATGTCTGGAGCCGGCGAGGAGGACAAGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAGCTGATGAACGCTTATTGTGACCGCCAGTCTGTGGACATGAATGCCATTG
Block sizes:
49 (upstream exon),
49 (downstream exon)
Score:
1791ATCGCCGGAAAACTAACCCCTAACGATGTCTGGAGCCGGCGAGGAGGACAAGAAGCCCGCGGAGGGCGGCGCCCACATCAACCTTAAGGTCAAGGGACAGgtcagcacgc ... aattgtatagGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAGCTGATGAACGCTTATTGTGACCGCCAGTCTGTGGACATGAATGCCATTG