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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCTCGACGCTCTCGTCGACGCGGCGGCCGCACGACTCGCCGCCGACGCCGGAGTTCTCCCGGGCCACGTCGTCGCGCTTTCCTTCCCCAACACCGTCGAGgtttgtctccttctttcgaattcgatcggtcatgttcctgcctgcgcgacgcagagccccagagtagcgggagtcgggacctgacgcgcgtgcgaacgcgatctgtatgtacacag

Basic information

species Zea mays
transcript GRMZM2G074759_T01
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G074759_T01 (Zea mays), 5'ss of exon 1
lower sequence: LOC_Os04g58710.1 (Oryza sativa), 5'ss of exon 1
CCTCGACGCTCTCGTCGACGCGGCGGCCGCACGACTCGCCGCCGACGCCGGAGTTCTCCCGGGCCACGTCGTCGCGCTTTCCTTCCCCAACACCGTCGAGgtttgtctccttctttcgaattcgatcggtcatgttcctgcctgcgcgacgcagagccccagagtagcgggagtcgggacctgacgcgcgtgcgaacgcgatctgtatgtacacag
 |||||||| ||||||||||| |||||||| || ||||||||||| || || || ||||| |||||||||||||||||  ||||||||||||||||||||||    | ||       |||       | | || |  | |  ||     |   ||||  | ||     |    || ||  ||   | |  |  | |                    
GCTCGACGCGCTCGTCGACGCCGCGGCCGCGCGCCTCGCCGCCGATGCGGGCGTGCTCCCCGGCCACGTCGTCGCGCTCGCCTTCCCCAACACCGTCGAGgtaaagcaccagtcacagaa----gctgttgatatcacgg--tgacgatcatcgagctgctga----tgctgatctggttcttgtgtgtttttgcag-------------------