1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
CGACTTTACCCCGCTGCTCCGCTTCCCTCTCTCGTGCTCGCCGCCCCACAGCTCGAAGACGACGAGGTGGCCTCAGCACACGCGCGCGCAACCATGGCAGgtgagttcaccgccacttcctccaccgcctcccacttatttaatccgtgctgcgacgctgttgacctctttcgatttgtccggccgaatcgaatagtagg...
species | Zea mays |
transcript | GRMZM2G069676_T03 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCTCGAAGCCGACGAGGTGGCCTCAGCACACGCGCGCGCAGCCATGGCAG CATTATCAGCGAAGACCATACAAAATGCATTCTTGGCACAACACACACGGAEST: gi|71332327|gb|DR803103.1|DR803103
genomic: GCTCGAAGACGACGAGGTGGCCTCAGCACACGCGCGCGCAACCATGGCAGgtgagttcac ... atttgtgcagCATTATCAGCGAAGACCATACAAAATGCATTCTTGGCACAACACACACGGA
EST: GCTCGAAGACGACGAGGTGGCCTCAGCACACGCGCGCGCAACCATGGCAG CATTATCAGCGAAGACCATACAAAATGCATTCTTGGCACAACACACACGGAEST: gi|76289294|gb|DV028862.1|DV028862
genomic: GCTCGAAGACGACGAGGTGGCCTCAGCACACGCGCGCGCAACCATGGCAGgtgagttcac ... atttgtgcagCATTATCAGCGAAGACCATACAAAATGCATTCTTGGCACAACACACACGGA
EST: GCTCGAAGACGACGAGGTGGCCTCAGCACACGCGCGCGCAACCATGGCAG CATTATCAGCGAAGACCATACAAAATGCATTCTTGGCACAACACACACGGAEST: gi|32797542|gb|CD949778.1|CD949778
genomic: GCTCGAAGACGACGAGGTGGCCTCAGCACACGCGCGCGCAACCATGGCAGgtgagttcac ... atttgtgcagCATTATCAGCGAAGACCATACAAAATGCATTCTTGGCACAACACACACGGA
EST: GCTCGAAGCCGACGAGGTGGCCTCAGCACACGCGCGCGCAGCCATGGCAG CATTATCAGCGAAGACCATACAAAATGCATTCTTGGCACAACACACACGGAEST: gi|211048053|gb|FL040816.1|FL040816
genomic: GCTCGAAGACGACGAGGTGGCCTCAGCACACGCGCGCGCAACCATGGCAGgtgagttcac ... atttgtgcagCATTATCAGCGAAGACCATACAAAATGCATTCTTGGCACAACACACACGGA
EST: CNTCGAAGACGACGAGGTGGCCTCAGCACACGCGCGCGCAACCATGGCAG CATTATCAGCGAAGACCATACAAAATGCATTCTTGGCACAACACACACGGAEST: gi|101389188|gb|EB816549.1|EB816549
genomic: C-TCGAAGACGACGAGGTGGCCTCAGCACACGCGCGCGCAACCATGGCAGgtgagttcac ... atttgtgcagCATTATCAGCGAAGACCATACAAAATGCATTCTTGGCACAACACACACGGA
EST: GCTCGAAGACGACGAGGTGGCCTCAGCACACGCGCGCGCAACCATGGCAG CATTATCAGCGAAGACCATACAAAATGCATTCTTGGCACAACACACACGGA
genomic: GCTCGAAGACGACGAGGTGGCCTCAGCACACGCGCGCGCAACCATGGCAGgtgagttcac ... atttgtgcagCATTATCAGCGAAGACCATACAAAATGCATTCTTGGCACAACACACACGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGACTTTACCCCGCTGCTCCGCTTCCCTCTCTCGTGCTCGCCGCCCCACAGCTCGAAGACGACGAGGTGGCCTCAGCACACGCGCGCGCAACCATGGCAGgtgagttcaccgccacttcctccaccgcctcccacttatttaatccgtgctgcgacgctgttgacctctttcgatttgtccggccgaatcgaatagtagg
- - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -caccgcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccaccgc