1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TCCAACCGGAAGGCGTGCCAGAGCTTCGACCAGTTCGACATCTCGTTCAAGCCCAAGCAGGCTGGGGGACGACCCATCTTCGTCCTCGTCGACCGCGGAGgtgaccttggctctgtctgtcctgccccttttttttttctggtccgggctgttgttgctccattcaaagttgcgcgcgatagttatttttggaaacctat...
species | Zea mays |
transcript | GRMZM2G067546_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCCCAAGCAGGCTGGGGGACGACCCATCTTCGTCCTCGTCGACCGCGGAG AATGTTTCTTCACAACCAAGGCATGGAATGCACAAAATGCTGGAGCTGCTGEST: gi|76918439|gb|DV167295.1|DV167295
genomic: GCCCAAGCAGGCTGGGGGACGACCCATCTTCGTCCTCGTCGACCGCGGAGgtgaccttgg ... taatgaacagAATGTTTCTTCACAACCAAGGCATGGAATGCACAAAATGCTGGAGCTGCTG
EST: GCCCAAGCAGGCTGGGGGACGACCCATCTTCGTCCTCGTCGACCGCGGAG AATGTTTCTTCACAACCAAGGCATGGAATGCACAAAATGCTGGAGCTGCTGEST: gi|71430339|gb|DR811389.1|DR811389
genomic: GCCCAAGCAGGCTGGGGGACGACCCATCTTCGTCCTCGTCGACCGCGGAGgtgaccttgg ... taatgaacagAATGTTTCTTCACAACCAAGGCATGGAATGCACAAAATGCTGGAGCTGCTG
EST: GCCCAAGCAGGCTGGGGGACGACCCATCTTCGTCCTCGTCGACCGCGGAG AATGTTTCTTCACAACCAAGGCATGGAATGCACAAAATGCTGGAGCTGCTGEST: gi|149099686|gb|EE185735.2|EE185735
genomic: GCCCAAGCAGGCTGGGGGACGACCCATCTTCGTCCTCGTCGACCGCGGAGgtgaccttgg ... taatgaacagAATGTTTCTTCACAACCAAGGCATGGAATGCACAAAATGCTGGAGCTGCTG
EST: GCCCAAGCAGGCTGGGGGACGACCCATCTTCGTCCTCGTCGACCGCGGAG AAATGTT-CTTCACAACCAAGGCATGGAATGCACAAAATGCTGGAGCTGCTEST: gi|4225493|gb|AI395946.1|AI395946
genomic: GCCCAAGCAGGCTGGGGGACGACCCATCTTCGTCCTCGTCGACCGCGGAGgtgaccttgg ... taatgaacagAA-TGTTTCTTCACAACCAAGGCATGGAATGCACAAAATGCTGGAGCTGCT
EST: GCCCAAGCAGGCTGGGGGACGACCCATCTTCGTCCTCGTCGACCGCGGAG AATGTTTCTTCACAACCAAGGCATGGAATGCACAAAATGCTGGAGCTGCTGEST: gi|148949556|gb|EC895023.2|EC895023
genomic: GCCCAAGCAGGCTGGGGGACGACCCATCTTCGTCCTCGTCGACCGCGGAGgtgaccttgg ... taatgaacagAATGTTTCTTCACAACCAAGGCATGGAATGCACAAAATGCTGGAGCTGCTG
EST: GCCCAAGCAGGCTGGGGGACGACCCATCTTCGTCCTCGTCGACCGCGGAG AATGTTTCTTCACAACCAAGGAATGGAATGCACAAAATGCTGGAGCTGEST: gi|148962556|gb|EE013432.2|EE013432
genomic: GCCCAAGCAGGCTGGGGGACGACCCATCTTCGTCCTCGTCGACCGCGGAGgtgaccttgg ... taatgaacagAATGTTTCTTCACAACCAAGGCATGGAATGCACAAAATGCTGGAGCTG
EST: GCCCAAGCAGGCTGGGGGACGACCCATCTTCGTCCTCGTCGACCGCGGAG AATGTTTCTTCACAACCAAGGCATGGAATGCACAAAATGCTGGAGCTGCTG
genomic: GCCCAAGCAGGCTGGGGGACGACCCATCTTCGTCCTCGTCGACCGCGGAGgtgaccttgg ... taatgaacagAATGTTTCTTCACAACCAAGGCATGGAATGCACAAAATGCTGGAGCTGCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCCAACCGGAAGGCGTGCCAGAGCTTCGACCAGTTCGACATCTCGTTCAAGCCCAAGCAGGCTGGGGGACGACCCATCTTCGTCCTCGTCGACCGCGGAGgtgaccttggctctgtctgtcctgccccttttttttttctggtccgggctgttgttgctccattcaaagttgcgcgcgatagttatttttggaaacctat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctgcccc