1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GGATGGGGTTCTGCAAGCCGCGGATGCCAAGGATTGGGTTTACAAGGGGGAAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATGgtaagcgctgagtaggttcttactgagtgtgcacgcatcgatcacttgattttaggggctcaatgtgtgattcacgggtgccgccattcgagctccagat...
species | Zea mays |
transcript | GRMZM2G067299_T06 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATG CTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGGEST: gi|211198332|gb|FL351292.1|FL351292
genomic: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATGgtaagcgctg ... ttgttttcagCTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGG
EST: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATG CTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGGEST: gi|211060902|gb|FL310715.1|FL310715
genomic: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATGgtaagcgctg ... ttgttttcagCTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGG
EST: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATG CTTGGGAAGGTACTGCGGCTCAAGAAGATTCTAAAAAA
genomic: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATGgtaagcgctg ... ttgttttcagCTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGATGGGGTTCTGCAAGCCGCGGATGCCAAGGATTGGGTTTACAAGGGGGAAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATGgtaagcgctgagtaggttcttactgagtgtgcacgcatcgatcacttgattttaggggctcaatgtgtgattcacgggtgccgccattcgagctccagat
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