1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CCGCCTCCGCCACGCCACCTCCCCTCCCCTCCCGCCGTGCGCCCCGATCCCTCGCCGCCCCACGCCGGCCTCATCTCGCCGAGGACTGGATCGCCGGGGGgtaagcaagctgacccctttaactctttctcgccgctgccccctcgtcccgcggccgccctatgcttgcttgttcctctccttgtctgtactactaaatt...
species | Zea mays |
transcript | GRMZM2G064212_T02 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTCGCCGCCCCACGCCGGCCTCATCTCGCCGAGGACTGGATCGCCGGGGG GACATCCTGGGTGTCCTTCACACACATGCGGCGTTAGGTGATGACGAGCTTEST: gi|148948139|gb|EC893649.2|EC893649
genomic: CTCGCCGCCCCACGCCGGCCTCATCTCGCCGAGGACTGGATCGCCGGGGGgtaagcaagc ... gctttgctagGACATCCTGGGTGTCCTTCACACACATGCGGCGTTAGGTGATGACGAGCTT
EST: AGGACTGGATCGCCGGGGG GACATCCTGGGTGTCCTTCACACACATGCGGCGTTAGGTGATGACGAGCTTEST: gi|93284688|gb|EB676952.1|EB676952
genomic: AGGACTGGATCGCCGGGGGgtaagcaagc ... gctttgctagGACATCCTGGGTGTCCTTCACACACATGCGGCGTTAGGTGATGACGAGCTT
EST: AGGACTGGATCGCCGGGGG GACATCCTGGGTGTCCTTCACACACATGCGGCGTTAGGTGATGACGAGCTTEST: gi|101392788|gb|EB818325.1|EB818325
genomic: AGGACTGGATCGCCGGGGGgtaagcaagc ... gctttgctagGACATCCTGGGTGTCCTTCACACACATGCGGCGTTAGGTGATGACGAGCTT
EST: CTCGCCGCCCCACGCCGGCCTCATCTCGCCGAGGACTGGATCGCCGGGGG GACATCCTGGGTGTCCTTCACACACATGCGGCGTTAGGTGATGACGAGCTTEST: gi|76926912|gb|DV171049.1|DV171049
genomic: CTCGCCGCCCCACGCCGGCCTCATCTCGCCGAGGACTGGATCGCCGGGGGgtaagcaagc ... gctttgctagGACATCCTGGGTGTCCTTCACACACATGCGGCGTTAGGTGATGACGAGCTT
EST: CTCGCCGCCCCACGCCGGCCTCATCTCGCCGAGGACTGGATCGCCGGGGG GACATCCTGGGTGTCCTTCACACACATGCGGCGTTAGGTGATGACGAGCTTEST: gi|148958416|gb|EC904649.2|EC904649
genomic: CTCGCCGCCCCACGCCGGCCTCATCTCGCCGAGGACTGGATCGCCGGGGGgtaagcaagc ... gctttgctagGACATCCTGGGTGTCCTTCACACACATGCGGCGTTAGGTGATGACGAGCTT
EST: CTCGCCGCCCCACGCCGGCCTCATCTCGCCGAGGACTGGATCGCCGGGGG GACATCCTGGGTGTCCTTCACACACATGCGGCGTTAGGTGATGACGAGCTTEST: gi|148965028|gb|EE015858.2|EE015858
genomic: CTCGCCGCCCCACGCCGGCCTCATCTCGCCGAGGACTGGATCGCCGGGGGgtaagcaagc ... gctttgctagGACATCCTGGGTGTCCTTCACACACATGCGGCGTTAGGTGATGACGAGCTT
EST: CGCCGCCCCACGCCGGCCTCATCTCGCCGAGGACTGGATCGCCGGGGG GACATCCTGGGTGTCCTTCACACACATGCGGCGTTAGGTGATGACGAGCTT
genomic: CGCCGCCCCACGCCGGCCTCATCTCGCCGAGGACTGGATCGCCGGGGGgtaagcaagc ... gctttgctagGACATCCTGGGTGTCCTTCACACACATGCGGCGTTAGGTGATGACGAGCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCGCCTCCGCCACGCCACCTCCCCTCCCCTCCCGCCGTGCGCCCCGATCCCTCGCCGCCCCACGCCGGCCTCATCTCGCCGAGGACTGGATCGCCGGGGGgtaagcaagctgacccctttaactctttctcgccgctgccccctcgtcccgcggccgccctatgcttgcttgttcctctccttgtctgtactactaaatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccccctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccgccct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cctctcct