Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|5922342|gb|AW055631.1|AW055631EST: ATTACACTGTCTTGTTCGGTGTTTCAANAAGCATGGGGATAGGATCTCAG CTCATCTGGGACCGTGCCCTTGGCCTGCCACTTGAGAGGCCGAAGAGTGTT
genomic: ATTACACTGTCTTGTTCGGTGTTTCAAGAAGCATGGGGATAGGATCTCAGgtctgccttc ... tatgatgcagCTCATCTGGGACCGTGCCCTTGGCCTGCCACTTGAGAGGCCGAAGAGTGTT
EST:
gi|37399560|gb|CF637110.1|CF637110EST: ATTACACTGTCTTGTTCGGTGTTTCAAGAAGCATGGGGATAGGATCTCAG CTCATCTGGGACCGTGCCCTTGGCCTGCCACTTGAGAGGCCGAAGAGTGTT
genomic: ATTACACTGTCTTGTTCGGTGTTTCAAGAAGCATGGGGATAGGATCTCAGgtctgccttc ... tatgatgcagCTCATCTGGGACCGTGCCCTTGGCCTGCCACTTGAGAGGCCGAAGAGTGTT
EST:
gi|7227830|gb|AW566471.1|AW566471EST: TCGGTGTTTCAAGAAGCATGGGGATAGGATTTCAG CTCATCTGGGACCGTGCCCTTGGCCTGCCCCTTGAAAGGCCGAAGAGTGTT
genomic: TCGGTGTTTCAAGAAGCATGGGGATAGGATCTCAGgtctgccttc ... tatgatgcagCTCATCTGGGACCGTGCCCTTGGCCTGCCACTTGAGAGGCCGAAGAGTGTT
EST:
gi|18162925|gb|BM332764.1|BM332764EST: GCATGGGGATAGGATCTCAG CTCATCTGGGACCGTGCCCTTGGCCTGCCACTTGAGAGGCCGAAGAGTGTT
genomic: GCATGGGGATAGGATCTCAGgtctgccttc ... tatgatgcagCTCATCTGGGACCGTGCCCTTGGCCTGCCACTTGAGAGGCCGAAGAGTGTT
EST:
gi|60359668|gb|DN226641.1|DN226641EST: GTCTTGTTCGGTGTTTCAAGAAGCATGGGGATAGGATCTCAG CTCATCTGGGACCGTGCCCTTGGCCTGCCACTTGAGAGGCCGAAGAGTGTT
genomic: GTCTTGTTCGGTGTTTCAAGAAGCATGGGGATAGGATCTCAGgtctgccttc ... tatgatgcagCTCATCTGGGACCGTGCCCTTGGCCTGCCACTTGAGAGGCCGAAGAGTGTT
EST:
gi|40334831|gb|CK368901.1|CK368901EST: ATTACACTGTCTTGTTCGGTGTTTCAAGAAGCATGGGGATAGGATCTCAG CTCATCTGGGACCGTGCCCTTGGCCTGCCACTTGAGAGGCCGAAGAGTGTT
genomic: ATTACACTGTCTTGTTCGGTGTTTCAAGAAGCATGGGGATAGGATCTCAGgtctgccttc ... tatgatgcagCTCATCTGGGACCGTGCCCTTGGCCTGCCACTTGAGAGGCCGAAGAGTGTT
EST:
gi|111433800|gb|EE298053.1|EE298053EST: ATTACACTGTCTTGTTCGGGGTTTCAAGAAGCATGGGGATAGGATCTCAG CTCATCTGGGACCGTGCCCTTGGCCTGCCACTTGAGAGGCCGAAGAGTGTT
genomic: ATTACACTGTCTTGTTCGGTGTTTCAAGAAGCATGGGGATAGGATCTCAGgtctgccttc ... tatgatgcagCTCATCTGGGACCGTGCCCTTGGCCTGCCACTTGAGAGGCCGAAGAGTGTT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AAATCTAGTTCTGAGTGAGCACTAATGTTTGGAACACTAACTGTGCAGGTATTACACTGTCTTGTTCGGTGTTTCAAGAAGCATGGGGATAGGATCTCAGgtctgccttctaccttctcttgatatagtttcttagtaattctgctggctaattttgtttgattatttatgatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC