1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CGGCGACGAACCTGAGGGCTCCGACAGCCAGCGCCAGCGGAAGCGGTACCACCGCCACACCCCGCGCCAGATTCAGCAGCTCGAGGCgtacggttctctctcgtttcgttttgtttccatttcttttgctgtttcttcgttctgtccggtccggccaccgccctcgtggttgttgacggccggcgtcgtcgtgagtcttgatgaattgacggaaaggaatgtaatggtgcgtgttcgccggtgaccgcag
species | Zea mays |
transcript | GRMZM2G062318_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CGGAAGCGGTACCACCGCCACACCCCGCGCCAGATTCAGCAGCTCGAGGC GATGTTCAAGGAGTGCCCGCACCCCGACGAGAACCAGCGCGCCGCGCTCAGEST: gi|71447393|gb|DR828443.1|DR828443
genomic: CGGAAGCGGTACCACCGCCACACCCCGCGCCAGATTCAGCAGCTCGAGGCgtacggttct ... gtgaccgcagGATGTTCAAGGAGTGCCCGCACCCCGACGAGAACCAGCGCGCCGCGCTCAG
EST: CGGAAGCGGTACCACCGCCACACCCCGCGCCAGATTCAGCAGCTCGAGGC GATGTTCAAGGAGTGCCCGCACCCCGACGAGAACCAGCGCGCCGCGCTCAG
genomic: CGGAAGCGGTACCACCGCCACACCCCGCGCCAGATTCAGCAGCTCGAGGCgtacggttct ... gtgaccgcagGATGTTCAAGGAGTGCCCGCACCCCGACGAGAACCAGCGCGCCGCGCTCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGGCGACGAACCTGAGGGCTCCGACAGCCAGCGCCAGCGGAAGCGGTACCACCGCCACACCCCGCGCCAGATTCAGCAGCTCGAGGCgtacggttctctctcgtttcgttttgtttccatttcttttgctgtttcttcgttctgtccggtccggccaccgccctcgtggttgttgacggccggcgtcgtcgtgagtcttgatgaattgacggaaaggaatgtaatggtgcgtgttcgccggtgaccgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC