1 5' 3' | 2 5' 3' | 3 5' 3' |
CCCCAAAGACATCAGCAACGGCTGCCTCCTCAAGCCGTCCGCCACCGCCGCGCCGCCGCTCGTCCGCATCTCCGGCCGCCGCGACGACCTCTACACGCTGgtatatatatgctggcacttgtctgctcgatctgtgcctccagttgacatgcatggatggattgcacaacttgctgcgtgtcgcag
species | Zea mays |
transcript | GRMZM2G059358_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CGCCGCCGCTCGTCCGCATCTCCGGCCGCCGCGACGACCTCTACACGCTG ATCATGACGGACCCAGATGCGCCTAGCCCCAGCGACCCGACCATGAGGGAGEST: gi|211482448|gb|FL295157.1|FL295157
genomic: CGCCGCCGCTCGTCCGCATCTCCGGCCGCCGCGACGACCTCTACACGCTGgtatatatat ... cgtgtcgcagATCATGACGGACCCAGATGCGCCTAGCCCCAGCGACCCGACCATGAGGGAG
EST: CGCCGTCGCTCGTCCGCATCTCCGGTCGCCGCGACGACCTCTACACGTTG ATCATGACGGACCCAGATGCGCCTAGCCCCAGCGACCCGACC
genomic: CGCCGCCGCTCGTCCGCATCTCCGGCCGCCGCGACGACCTCTACACGCTGgtatatatat ... cgtgtcgcagATCATGACGGACCCAGATGCGCCTAGCCCCAGCGACCCGACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCCCAAAGACATCAGCAACGGCTGCCTCCTCAAGCCGTCCGCCACCGCCGCGCCGCCGCTCGTCCGCATCTCCGGCCGCCGCGACGACCTCTACACGCTGgtatatatatgctggcacttgtctgctcgatctgtgcctccagttgacatgcatggatggattgcacaacttgctgcgtgtcgcag
- - - - - - - - - - - - - - - - - - - - - - - - - CGCCGCCG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -GGCCGCCG