Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCGTGGTGTTCTTCGACGTGACCATCGGGTCCATCGCCGCCGGCCGCATCAAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcctaaaccttcaactaaccataaaccctaggtttcattggtattattctttcttctgccgctgatgtatttgacacttggatagatctctaatcgtgttgctttgtttgtttcag

Basic information

species Zea mays
transcript GRMZM2G057329_T01
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G057329_T01 (Zea mays), 5'ss of exon 1
lower sequence: LOC_Os03g59700.1 (Oryza sativa), 5'ss of exon 1
CCGTGGTGTTCTTCGACGTGACCATCGGGTCCATCGCCGCCGGCCGCATCAAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcctaaaccttcaactaaccataaaccctaggtttcattggtattattctttcttctgccgctgatgtatttgacac-ttggatagatctctaatcgtgttgctttgtttgtttcag
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||  || || | | |     ||  || ||||||||||||| |||  || ||| || | ||||||  |    ||  |||||    |   |  ||| | |  || |  || ||  || |||||||
CGGTGGTGTTCTTCGACGTGACCATCGGGTCCATCCCCGCCGGCCGCATCAAGATGGAGCTCTTCGCCGACATCGTCCCCAAGACGGCGGAGAACTTCCGgtactgacccagagccctcgctcgccttaaaccctaggttccatctgt-ttaatcctgcttctgatgtgtttgcttttgatggatctcactgatttgtt-tcat-ctgtttgtttggtttcag

upper sequence: GRMZM2G057329_T01 (Zea mays), 5'ss of exon 1
lower sequence: GLYMA13G26260.1 (Glycine max), 5'ss of exon 1
CCGTGGTGTTCTTCGACGTGACCATCGGGTCCATCGCCGCCGGCCGCATCAAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcctaaaccttcaactaaccataaaccctaggtttcattggtattattctttcttctgccgctgatgtatttgacacttggatagatctctaatcgtgttgctttgtttgtttcag
|| | || |||||||| || ||||||||   |||  ||||||| || ||||||||||| ||||||||||| || |||||||| || || ||||| ||| |||      |||    |    |||  | |||| | |  ||||  ||  | |  | |||  ||   | ||      || |  | |||    |   ||   | | ||    |    |        
CCATCGTCTTCTTCGATGTCACCATCGGTAACATTCCCGCCGGTCGAATCAAGATGGAACTCTTCGCCGATATTGCCCCCAAAACTGCCGAGAATTTCAGgta----tctacgttt----ctactcttaaagcgtgcgttttcttcttttagtgcttagttagactgc------atcttgcccttaagcattgctaccaacttgcgaatgaact--------

upper sequence: GRMZM2G057329_T01 (Zea mays), 5'ss of exon 1
lower sequence: GLYMA09G11960.1 (Glycine max), 5'ss of exon 1
CCGTGGTGTTCTTCGACGTGACCATCGGGTCCATCGCCGCCGGCCGCATCAAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcctaaaccttcaactaaccataaaccctaggtttcattggtattattctttcttctgccgc-tgatgtatttga-cacttggatagatctctaatcgtgttgctttgtttgtttcag
|| | || |||||||| || ||||||||   |||  ||||||| || ||||||||||| ||||||||||| || |||||||| || || ||||| ||| |||      |||    |    |||  | |||| | |  ||||  ||  | |  | |||  ||   | ||    ||  ||| | || |   |   |  |      |   |                
CCATCGTCTTCTTCGATGTCACCATCGGTAACATTCCCGCCGGTCGAATCAAGATGGAACTCTTCGCCGATATTGCCCCCAAAACTGCCGAGAATTTCAGgta----tctacgttt----ctactcttaaagcgtgcgttttcttcttttagtgcttagttagactgcaccttgcctttaagcattgctaccaacttgcgcatgaact----------------

upper sequence: GRMZM2G057329_T01 (Zea mays), 5'ss of exon 1
lower sequence: AT2G38730.1 (Arabidopsis thaliana), 5'ss of exon 1
CCGTGGTGTTCTTCGACGTGACCATCGGGTCCATCGCCGCCGGCCGCATCAAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcctaaaccttcaactaaccataaaccctaggtttcattggtatt--attctttcttctgccgctgatgtat-ttgacacttggatagatctctaatcgtgttgctttgtttgtttcag------
                        | ||    ||| ||||||| || |||||||||||||||||||||||||| || ||||| ||||| || |||||| ||   |   ||  ||       | | |  |    || | ||   ||  | ||  ||  || || |   || |  | ||| ||    | || ||     ||   |   ||||  || |  | || ||      
------------------------TTGGTGGTATCCCCGCCGGTCGTATCAAGATGGAGCTCTTCGCCGACATTGCTCCCAAAACCGCTGAAAACTTCAGGCAGT--TCTGTACT----GGTGAACTCAGgtactcgattctgtttctttttaatgtttactccattcgattctctatcttcgttcctgcatcttattcgtttgaggttgaatt-tacgatttagtatttg

upper sequence: GRMZM2G057329_T01 (Zea mays), 5'ss of exon 1
lower sequence: Vv13s0084g00620.t01 (Vitis vinifera), 5'ss of exon 1
CCGTGGTGTTCTTCGACGTGACCATCGGGTCCATCGCCGCCGGCCGCATCAAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcctaaaccttcaactaaccataaaccctaggtttcattggtattattctttcttctgccgctgatgtatttgacacttggatagatctctaatcgtgt------tgctttgtttgttt-cag
                        ||||  ||||| ||||||| ||||||||||||||||||||| |||||||||||||||| ||||| || || ||| ||   |   ||  ||   | | ||    |      ||   ||   |    | | || || |  |          |  ||  |  ||   |   | |||  |  | |      | |  |  |  ||| |||
------------------------TCGGCACCATCCCCGCCGGTCGCATCAAGATGGAGCTCTTCTCCGACATCGCCCCCAAAACCGCTGAAAATTTCAGGCAGT--TCTGCACTGGCGAGTACAGgt---ttttattcttttctaacttcactcattttcttattttcaggatgatttccttttctttttctttcttcttatttgatgaatacaataatgatttgcag

upper sequence: GRMZM2G057329_T01 (Zea mays), 5'ss of exon 1
lower sequence: EFJ31848 (Selaginella moellendorffii), 5'ss of exon 1
CCGTGGTGTTCTTCGACGTGACCATCGGGTCCATCGCCGCCGGCCGCATCAAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcctaaaccttcaactaaccataaaccctaggtttcattggtat-tattctttcttctgccgctgatgtatttgacacttggatagatctctaatcgtgttgctttgtttgtttcag
|||| || ||||||||| | || |||||| |     | || || || |||||||||||||||||||||||||| |  |||||||| || ||||||||| |||  | |        ||| |||   | |      |  ||||||  | | | | |||||||||  || |                                                       
CCGTCGTCTTCTTCGACATCACAATCGGGACGGCGCCTGCTGGGCGGATCAAGATGGAGCTCTTCGCCGACATTGTTCCCAAGACGGCCGAGAACTTCAGgtattag--------ttctact--tcgtgtctgttttgtttcagagatttattttctttctttggcag-------------------------------------------------------

upper sequence: GRMZM2G057329_T01 (Zea mays), 5'ss of exon 1
lower sequence: EFJ38013 (Selaginella moellendorffii), 5'ss of exon 1
CCGTGGTGTTCTTCGACGTGACCATCGGGTCCATCGCCGCCGGCCGCATCAAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcctaaaccttcaactaaccataaaccctaggtttcattggtattattctttcttctgccgctgatgtatttgacacttggatagatctctaatcgtgttgctttgtttgtttcag
|||| || ||||||||| | || |||||| |     | || || || |||||||||||||||||||||||||| |  |||||||| || ||||||||| |||  | |    |  ||||   |  |  |      |  ||||||  | | |  ||| ||  | || |                                                        
CCGTCGTCTTCTTCGACATCACAATCGGGACGGCGCCTGCTGGGCGGATCAAGATGGAGCTCTTCGCCGACATTGTTCCCAAGACGGCCGAGAACTTCAGgtattagttcta--cttcg--tgtctgt-----ttttgtttcagagatttatttcctttctttggcag------------------------------------------------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211112964|gb|FL394568.1|FL394568
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|211494317|gb|FL423862.1|FL423862
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|19058149|gb|BM736816.1|BM736816
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|211023124|gb|FL428614.1|FL428614
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|19057931|gb|BM736598.1|BM736598
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|211494316|gb|FL423861.1|FL423861
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|87153432|gb|DY398221.1|DY398221
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|211452160|gb|FL396759.1|FL396759
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|211129147|gb|FL382949.1|FL382949
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|60349165|gb|DN216138.1|DN216138
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|60349812|gb|DN216785.1|DN216785
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|60394638|gb|DN227508.1|DN227508
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|211360429|gb|FL377716.1|FL377716
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|211357849|gb|FL385252.1|FL385252
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|87152302|gb|DY397091.1|DY397091
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|211073855|gb|FL392646.1|FL392646
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|211027097|gb|FL381991.1|FL381991
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|211365914|gb|FL387069.1|FL387069
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATNN
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|211099687|gb|FL379428.1|FL379428
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|22490292|gb|BU050215.1|BU050215
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|211206179|gb|FL469079.1|FL469079
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|211048939|gb|FL421705.1|FL421705
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|8577336|gb|BE129973.1|BE129973
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|211433999|gb|FL392548.1|FL392548
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|211254561|gb|FL409666.1|FL409666
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGATCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|78179385|gb|DV549758.1|DV549758
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|60398036|gb|DN230852.1|DN230852
EST:     AAGATGGAGCTTTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|211523932|gb|FL381031.1|FL381031
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG
EST: gi|211042680|gb|FL406379.1|FL406379
EST:     AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCG                         GCAGTTCTGCACTGGGGAGCATAG
genomic: AAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 24 (downstream exon)
Score: 200

CCGTGGTGTTCTTCGACGTGACCATCGGGTCCATCGCCGCCGGCCGCATCAAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG


Block sizes: 49 (upstream exon), 24 (downstream exon)
Score: 94

CCGTGGTGTTCTTCGACGTGACCATCGGGTCCATCGCCGCCGGCCGCATCAAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG


Block sizes: 49 (upstream exon), 24 (downstream exon)
Score: 155

CCGTGGTGTTCTTCGACGTGACCATCGGGTCCATCGCCGCCGGCCGCATCAAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG


Block sizes: 45 (upstream exon), 24 (downstream exon)
Score: 95

CCGTGGTGTTCTTCGACGTGACCATCGGGTCCATCGCCGCCGGCCGCATCAAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcct ... tttgtttcagGCAGTTCTGCACTGGGGAGCATAG


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CCGTGGTGTTCTTCGACGTGACCATCGGGTCCATCGCCGCCGGCCGCATCAAGATGGAGCTCTTCGCCGACATCGCCCCCAAGACCGCGGAGAACTTCCGgtgatggcctaaaccttcaactaaccataaaccctaggtttcattggtattattctttcttctgccgctgatgtatttgacacttggatagatctctaatcgtgttgctttgtttgtttcag

- - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA