1 5' 3' | 2 5' 3' | 3 5' 3' |
TGAACGCTAGTGTTCCATGCACACAGATTGATGCTGCACGATTAGCATCAGATCAGCAAAGCTTTATTTGCACGCGACCCATTGATAGACCTTACTGGACgtatgttacatgcctttaaacccattctaaagcatttcaatatttctctctctgcagtgctaatgtttttcacgttttatgctatag
species | Zea mays |
transcript | GRMZM2G057078_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GATCAGCAAAGCTTTATTTGCACGCGACCCATTGATAGACCTTACTGGAC TGGAATCATGAAGEST: gi|51237331|gb|CO897541.1|CO897541
genomic: GATCAGCAAAGCTTTATTTGCACGCGACCCATTGATAGACCTTACTGGACgtatgttaca ... tatgctatagTGGAATCATGAAG
EST: GATCAGCAAAGCTTTATTTGCACGCGACCCATTGATAGACCTTACTGGAC TGGAATCATGAAGATTGGCCAGGAATATATTTCATTGGTTGCACACCTGTCEST: gi|87156596|gb|DY401385.1|DY401385
genomic: GATCAGCAAAGCTTTATTTGCACGCGACCCATTGATAGACCTTACTGGACgtatgttaca ... tatgctatagTGGAATCATGAAGATTGGCCAGGAATATATTTCATTGGTTGCACACCTGTC
EST: GATCAGCAAAGCTTTATTTGCACGCGACCCATTGATAGACCTTACTGGAC TGGAATCATGAAGATTGGCCAGGAATATATTTCATTGGTTGCACACCTGTC
genomic: GATCAGCAAAGCTTTATTTGCACGCGACCCATTGATAGACCTTACTGGACgtatgttaca ... tatgctatagTGGAATCATGAAGATTGGCCAGGAATATATTTCATTGGTTGCACACCTGTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAACGCTAGTGTTCCATGCACACAGATTGATGCTGCACGATTAGCATCAGATCAGCAAAGCTTTATTTGCACGCGACCCATTGATAGACCTTACTGGACgtatgttacatgcctttaaacccattctaaagcatttcaatatttctctctctgcagtgctaatgtttttcacgttttatgctatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG