1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GGGCCTCCTCATCGGCGACTTTTCCGCCGGCGACAGGAAACAACGAACCAAACCACTTCTCTGTCGAGAGGCGTCGCGCTCCTCTCTTCGCCCTCTGCTGgtactgactgcgctggcttaaattgattacgtctatttcttgtatcgttggcaagtaatcctcgccttacttgttcgtgttgttcttccggcagttatttttcttaacccggctttctctcgattgctgcgtaaag
species | Zea mays |
transcript | GRMZM2G053767_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AACCACTTCTCTGTCGAGAGGCGTCGCGCTCCTCTCTTCGCCCTCTGCTG TTGAAGATGAGGAAGCTCAAGTTCCATGAGCAGAAGCTCCTCAAGAGGCACEST: gi|211353119|gb|FL043799.1|FL043799
genomic: AACCACTTCTCTGTCGAGAGGCGTCGCGCTCCTCTCTTCGCCCTCTGCTGgtactgactg ... ctgcgtaaagTTGAAGATGAGGAAGCTCAAGTTCCATGAGCAGAAGCTCCTCAAGAGGCAC
EST: AACCACTTCTCTGTCGAGAGGCGTCGCGCTCCTCTCTTCGCCCTCTGCTG TTGAAGATGAGGAAGCTCAAGTTCCATGAGCAGAAGCTCCTCAAGAGGCACEST: gi|50324261|gb|CO519387.1|CO519387
genomic: AACCACTTCTCTGTCGAGAGGCGTCGCGCTCCTCTCTTCGCCCTCTGCTGgtactgactg ... ctgcgtaaagTTGAAGATGAGGAAGCTCAAGTTCCATGAGCAGAAGCTCCTCAAGAGGCAC
EST: AACCACTTCTCTGTCGAGAGGCGTCGCGCTCCTCTCTTCGCCCTCTGCTG TTGAAGATGAGGAAGCTCAAGTTCCATGAGCAGAAGCTCCTCAAGAGGCACEST: gi|71438629|gb|DR819679.1|DR819679
genomic: AACCACTTCTCTGTCGAGAGGCGTCGCGCTCCTCTCTTCGCCCTCTGCTGgtactgactg ... ctgcgtaaagTTGAAGATGAGGAAGCTCAAGTTCCATGAGCAGAAGCTCCTCAAGAGGCAC
EST: AACCACTTCTCTGTCGAGAGGCGTCGCGCTCCTCTCTTCGCCCTCTGCTG TTGAAGATGAGGAAGCTCAAGTTCCATGAGCAGAAGCTCCTCAAGAGGCACEST: gi|211353120|gb|FL043800.1|FL043800
genomic: AACCACTTCTCTGTCGAGAGGCGTCGCGCTCCTCTCTTCGCCCTCTGCTGgtactgactg ... ctgcgtaaagTTGAAGATGAGGAAGCTCAAGTTCCATGAGCAGAAGCTCCTCAAGAGGCAC
EST: AACCACTTCTCTGTCGAGAGGCGTCGCGCTCCTCTCTTCGCCCTCTGCTG TTGAAGATGAGGAAGCTCAAGTTCCATGAGCAGAAGCTCCTCAAGAGGCACEST: gi|211353121|gb|FL043801.1|FL043801
genomic: AACCACTTCTCTGTCGAGAGGCGTCGCGCTCCTCTCTTCGCCCTCTGCTGgtactgactg ... ctgcgtaaagTTGAAGATGAGGAAGCTCAAGTTCCATGAGCAGAAGCTCCTCAAGAGGCAC
EST: AACCACTTCTCTGTCGAGAGGCGTCGCGCTCCTCTCTTCGCCCTCTGCTG TTGAAGATGAGGAAGCTCAAGTTCCATGAGCAGAAGCTCCTCAAGAGGCACEST: gi|211353122|gb|FL043802.1|FL043802
genomic: AACCACTTCTCTGTCGAGAGGCGTCGCGCTCCTCTCTTCGCCCTCTGCTGgtactgactg ... ctgcgtaaagTTGAAGATGAGGAAGCTCAAGTTCCATGAGCAGAAGCTCCTCAAGAGGCAC
EST: AACCACTTCTCTGTCGAGAGGCGTCGCGCTCCTCTCTTCGCCCTCTGCTG TTGAAGATGAGGAAGCTCAAGTTCCATGAGCAGAAGCTCCTCAAGAGGCAC
genomic: AACCACTTCTCTGTCGAGAGGCGTCGCGCTCCTCTCTTCGCCCTCTGCTGgtactgactg ... ctgcgtaaagTTGAAGATGAGGAAGCTCAAGTTCCATGAGCAGAAGCTCCTCAAGAGGCAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGCCTCCTCATCGGCGACTTTTCCGCCGGCGACAGGAAACAACGAACCAAACCACTTCTCTGTCGAGAGGCGTCGCGCTCCTCTCTTCGCCCTCTGCTGgtactgactgcgctggcttaaattgattacgtctatttcttgtatcgttggcaagtaatcctcgccttacttgttcgtgttgttcttccggcagttatttttcttaacccggctttctctcgattgctgcgtaaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC