Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|149087128|gb|EE176666.2|EE176666EST: CGGGAGCCCTTTTTATGACAAGAAGGGAGGCGCCAGGCGTGTGATTAACA GTTCTGAAGGGAGAGTTACCTGCATCTGCATGGAAGAGGGAGGAGACCCGC
genomic: CGGGAGCCCTTTTTATGACAAGAAGGGAGGCGCCAGGCGTGTGATTAACAgtgagctgct ... gtgtaagcagGTTCTGAAGGGAGAGTTACCTGCATCTGCATGGAAGAGGGAGGAGACCCGC
EST:
gi|149107107|gb|EE188997.2|EE188997EST: CGGGAGCCCTTTTTATGACAAGAAGGGAGGCGCCAGGCGTGTGATTAACA GTTCTGAAGGGAGAGTTACCTGCATCTGCATGGAAGAGGGAGGAGACCCGC
genomic: CGGGAGCCCTTTTTATGACAAGAAGGGAGGCGCCAGGCGTGTGATTAACAgtgagctgct ... gtgtaagcagGTTCTGAAGGGAGAGTTACCTGCATCTGCATGGAAGAGGGAGGAGACCCGC
EST:
gi|93015063|gb|EB640583.1|EB640583EST: CGGGAGCCCTTTTTATGACAAGAAGGGAGGCGCCAGGCGTGTGATTAACA GTTCTGAAGGGAGAGTTACCTGCATCTGCATGGAAGAGGGAGGAGACCCGC
genomic: CGGGAGCCCTTTTTATGACAAGAAGGGAGGCGCCAGGCGTGTGATTAACAgtgagctgct ... gtgtaagcagGTTCTGAAGGGAGAGTTACCTGCATCTGCATGGAAGAGGGAGGAGACCCGC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTGAGCAGAACCGTGCTACCTAGCTAATCCACAGGAGGAAGAGAGGAGAACGGGAGCCCTTTTTATGACAAGAAGGGAGGCGCCAGGCGTGTGATTAACAgtgagctgcttgctactctcttactacaaatctctttcgctgcttgctttccattgaaaatgatgtgatcttgcttaccacccacaccctgcaatccgaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG