Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|15426921|gb|BI542743.1|BI542743EST: AGCTGATAACGAAACCGAATGCTGACGGCCACGTGAACAACTATGTTCAG GTCTCCAGAGACGGCACGAGCGATGAAGAGAAGGAGCTTAGGGAGCGGTTG
genomic: AGCTGATAACGAAACCGAATGCTGACGGCCACGTGAACAACTATGTTCAGgtgagatcct ... ttggctgcagGTCTCCAGAGACGGCACGAGCGATGAAGAGAAGGAGCTTAGGGAGCGGTTG
EST:
gi|5650248|gb|AI920608.1|AI920608EST: AGCTGATAACGAAACCGAATGCTGACGGCCACGTGAACAACTATGTTCAG GTCTCCAGAGACGGCACGAGCGATGAAGAGAAGGAGCTTAGGGAGCGGTTG
genomic: AGCTGATAACGAAACCGAATGCTGACGGCCACGTGAACAACTATGTTCAGgtgagatcct ... ttggctgcagGTCTCCAGAGACGGCACGAGCGATGAAGAGAAGGAGCTTAGGGAGCGGTTG
EST:
gi|78021110|gb|DV489497.1|DV489497EST: AGCTGATAACGAAACCGAATGCTGACGGCCACGTGAACAACTATGTTCAG GTCTCCAGAGACGGCACGAGCGATGAAGAGAAGGAGCTTAGGGAGCGGTTG
genomic: AGCTGATAACGAAACCGAATGCTGACGGCCACGTGAACAACTATGTTCAGgtgagatcct ... ttggctgcagGTCTCCAGAGACGGCACGAGCGATGAAGAGAAGGAGCTTAGGGAGCGGTTG
EST:
gi|211335099|gb|FK972896.1|FK972896EST: AGCTGATAACGAAACCGAATGCTGACGGCCACGTGAACAACTATGTTCAG GTCTCCAGAGACGGCACGAGCGATGAAGAGAAGGAGCTTAGGGAGCGGTTG
genomic: AGCTGATAACGAAACCGAATGCTGACGGCCACGTGAACAACTATGTTCAGgtgagatcct ... ttggctgcagGTCTCCAGAGACGGCACGAGCGATGAAGAGAAGGAGCTTAGGGAGCGGTTG
EST:
gi|211409237|gb|FL441028.1|FL441028EST: AGCTGATAACGAAACCGAATGCTGACGGCCACGTGAACAACTATGTTCAG GTCTCCAGAGACGGCACGAGCGATGAAGAGAAGGAGCTTAGGGAGCGGTTG
genomic: AGCTGATAACGAAACCGAATGCTGACGGCCACGTGAACAACTATGTTCAGgtgagatcct ... ttggctgcagGTCTCCAGAGACGGCACGAGCGATGAAGAGAAGGAGCTTAGGGAGCGGTTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GTATGAATACAAATACGTAGTGGATGGCAAATGGCTATGCAACGAGCATGAGCTGATAACGAAACCGAATGCTGACGGCCACGTGAACAACTATGTTCAGgtgagatcctcctgtcccgtcaaatggatgccatagctgagggctgagagtgcacgcgtttttcttggctgcag
- - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG