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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAGCGGCGGCGCCGGCAGTTGGTAGCCGCGACCGAGACACGGCGGGTGACCTGCCCCGCCGCAGTCGGGGTGTATGTATTACCACCGCCAGAATTCCAGgtacccgttcttgatttgaacccatgtcggagtaggcgtaaattgagttagttagcacggacgcttcactttctttattattgtttcctaccatttttcc...

Basic information

species Zea mays
transcript GRMZM2G050658_T01
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|34391242|gb|CF384470.1|CF384470
EST:     GCCGCAGTCGGGGTGTATGTATTACCACCGCCAGAATTCCAG                         GAGACAATGGCAGACCAGTTAGGGTCTTACACTATTAGATCCCATGGAATG
genomic: GCCGCAGTCGGGGTGTATGTATTACCACCGCCAGAATTCCAGgtacccgttc ... gtttttgtagGAGACAATGGCAGACCAGTTAGGGTCTTACACTATTAGATCCCATGGAATG