1 5' 3' | 2 5' 3' | 3 5' 3' |
CCTAGCGCTGCGGACGCTGTCCAAGCCCATCGCCAGCCGCCTCAAGAGCCAGGCCGCCGTCCACCCCAAGTTCCGCAACTTCATCATCGCCATCGCCCAGgtatcctcttcctcctttcggtcaattatctacttgtaccaacaacctagggtagggctactcaaatcaaatcgggatcagggtcgacccacttccattt...
species | Zea mays |
transcript | GRMZM2G047509_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AGGCCGCCGTCCACCCCAAGTTCCGCAACTTCATCATCGCCATCCCCCAG GCAAACCACCAGATCACCACAAAGATACAAAGGCGCATTTATGGGCATGCCEST: gi|211206704|gb|FL036108.1|FL036108
genomic: AGGCCGCCGTCCACCCCAAGTTCCGCAACTTCATCATCGCCATCGCCCAGgtatcctctt ... attgtcacagGCAAACCACCAGATCACCACAAAGATACAAAGGCGCATTTATGGGCATGCC
EST: AGGCCGCCGTCCACCCCAAGTTCCGCAACTTCATCATCGCCATCGCCCAG GCAAACCACCAGATCACCACAAAGATACAAAGGCGCATTTATGGGCATGCCEST: gi|211206702|gb|FL036106.1|FL036106
genomic: AGGCCGCCGTCCACCCCAAGTTCCGCAACTTCATCATCGCCATCGCCCAGgtatcctctt ... attgtcacagGCAAACCACCAGATCACCACAAAGATACAAAGGCGCATTTATGGGCATGCC
EST: AGGCCGCTGTCCACCCCAAGTTCCGCAACTTCATCATCGCCATCGCCCAG GCAAACCACCAGATCACCACAAAGATACAGAGGCGCATTTATGGGCATGCCEST: gi|211206707|gb|FL036111.1|FL036111
genomic: AGGCCGCCGTCCACCCCAAGTTCCGCAACTTCATCATCGCCATCGCCCAGgtatcctctt ... attgtcacagGCAAACCACCAGATCACCACAAAGATACAAAGGCGCATTTATGGGCATGCC
EST: AGGCCGCCGTCCACCCCAAGTTCCGCAACTTCATCATCGCCATCGCCCAG GCAAACCACCAGATCACCACAAAGATACAAAGGCGCATTTATGGGCATGCCEST: gi|211206708|gb|FL036112.1|FL036112
genomic: AGGCCGCCGTCCACCCCAAGTTCCGCAACTTCATCATCGCCATCGCCCAGgtatcctctt ... attgtcacagGCAAACCACCAGATCACCACAAAGATACAAAGGCGCATTTATGGGCATGCC
EST: AGGCCGCTGTCCACCCCAAGTTCCGCAACTTCATCATCGCCATCGCCCAG GCAAACCACCAGATCACCACAAAGATACAGAGGCGCATTTATGGGCATGCCEST: gi|211206703|gb|FL036107.1|FL036107
genomic: AGGCCGCCGTCCACCCCAAGTTCCGCAACTTCATCATCGCCATCGCCCAGgtatcctctt ... attgtcacagGCAAACCACCAGATCACCACAAAGATACAAAGGCGCATTTATGGGCATGCC
EST: AGGCCGCCGTCCACCCCAAGTTCCGCAACTTCATCATCGCCATCGCCCAG GCAAACCACCAGATCACCACAAAGATACAAAGGCGCATTTATGGGCATGCC
genomic: AGGCCGCCGTCCACCCCAAGTTCCGCAACTTCATCATCGCCATCGCCCAGgtatcctctt ... attgtcacagGCAAACCACCAGATCACCACAAAGATACAAAGGCGCATTTATGGGCATGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCTAGCGCTGCGGACGCTGTCCAAGCCCATCGCCAGCCGCCTCAAGAGCCAGGCCGCCGTCCACCCCAAGTTCCGCAACTTCATCATCGCCATCGCCCAGgtatcctcttcctcctttcggtcaattatctacttgtaccaacaacctagggtagggctactcaaatcaaatcgggatcagggtcgacccacttccattt
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